RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 DNAJB2P25686 324 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 PRPHP41219 470 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 MTMR1Q13613 665 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 ACVR2BQ13705 512 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 PRR16Q569H4 304 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 IQSEC1Q6DN90 963 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 CCDC62Q6P9F0 684 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 SLFN12Q8IYM2 578 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 C4orf32Q8N8J7 132 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 CYP2W1Q8TAV3 490 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 NFASCO94856 1347 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 TMEM265A0A087WTH1 108 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 AKR1A1P14550 325 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 PBX2P40425 430 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 ACLYP53396 1101 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 KRT85P78386 507 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 FPGSQ05932 587 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 PTPAQ15257 358 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 ZNF174Q15697 407 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 RNF180Q86T96 592 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 GIMAP8Q8ND71 665 aaPredicted RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 RIT2Q99578 217 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 TBC1D22BQ9NU19 505 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 Q9Y3F1 56 aa13.16□□□□□ -0.3
CHMP2A-207ENST00000600804 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 IPO5O00410 1097 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 CTAGE5O15320 804 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 MSH4O15457 936 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 PPP6R2O75170 966 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 ARP10275 920 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 KCNA2P16389 499 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 MCM7P33993 719 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 PTGDRQ13258 359 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 NEDD9Q14511 834 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 NBR1Q14596 966 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 CALCRLQ16602 461 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 DUSP28Q4G0W2 176 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 FBXO16Q8IX29 292 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 HAS1Q92839 578 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 SCAND2PQ9GZW5 306 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 RCOR1Q9UKL0 485 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-207ENST00000600804 WDR81Q562E7 1941 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 PSMD10O75832 226 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 TIMP1P01033 207 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 CDK7P50613 346 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 NKX3-2P78367 333 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 KCNA10Q16322 511 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 METTL7BQ6UX53 244 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 TSEN34Q9BSV6 310 aaKnown RBP13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 STARD7Q9NQZ5 370 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
CHMP2A-207ENST00000600804 ELP1O95163 1332 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 ATP9AO75110 1047 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 UBA1P22314 1058 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 PTGS1P23219 599 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms