RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 MAGEB3O15480 346 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 VAV1P15498 845 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 GM2AP17900 193 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 GALK1P51570 392 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 RHBDL3P58872 404 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 ARPC4P59998 168 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SPAG1Q07617 926 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 CCDC152Q4G0S7 254 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 KANK3Q6NY19 840 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SLC2A7Q6PXP3 512 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 KRI1Q8N9T8 703 aaKnown RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SCG3Q8WXD2 468 aaKnown RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SEC31BQ9NQW1 1179 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 CTNND2Q9UQB3 1225 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SETBP1Q9Y6X0 1596 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 PDGFRBP09619 1106 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 CCNB1P14635 433 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 C14orf80Q86SX3 495 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SMYD4Q8IYR2 804 aaPredicted RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 NAT14Q8WUY8 206 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 TLCD1Q96CP7 247 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 ISCUQ9H1K1 167 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 HEY1Q9Y5J3 304 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 N6AMT1Q9Y5N5 214 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 RFX7Q2KHR2 1363 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 CPLX1O14810 134 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 ASMTLO95671 621 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 PORP16435 677 aaPredicted RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 SKIV2L2P42285 1042 aaKnown RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 DNA2P51530 1060 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 GEMIN4P57678 1058 aaKnown RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 PDE1BQ01064 536 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 PARP6Q2NL67 630 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 TMEM259Q4ZIN3 620 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 CHST3Q7LGC8 479 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 FITM2Q8N6M3 262 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 FAM13CQ8NE31 585 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 TTC8Q8TAM2 541 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 DYDC2Q96IM9 177 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
NFKB1-212ENST00000600343 TXLNGQ9NUQ3 528 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 RASAL2Q9UJF2 1139 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 ABCC1P33527 1531 aa10.7□□□□□ -0.7
NFKB1-212ENST00000600343 A6NJR5 290 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 RAD51CO43502 376 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 UNC5CO95185 931 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 LMNAP02545 664 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 SAFBQ15424 915 aaKnown RBP eCLIP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 ZNF362Q5T0B9 420 aaPredicted RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 SNX30Q5VWJ9 437 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 RIBC1Q8N443 379 aaPredicted RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 DQX1Q8TE96 717 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 SREK1Q8WXA9 508 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 TAF4BQ92750 862 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 EIF2AQ9BY44 585 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 SH2D4AQ9H788 454 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 BTBD7Q9P203 1132 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 RABL2AQ9UBK7 228 aaPredicted RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 BCL9O00512 1426 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 SIGLEC16A6NMB1 481 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 ZPR1O75312 459 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 LYNP07948 512 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 RASA1P20936 1047 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 CEBPAP49715 358 aaPredicted RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 DMPKQ09013 629 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 HDGFL2Q7Z4V5 671 aaPredicted RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 VPS37DQ86XT2 251 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 KLHL7Q8IXQ5 586 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 NME8Q8N427 588 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 ATP6V0A1Q93050 837 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 CCDC28BQ9BUN5 200 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 DCLRE1BQ9H816 532 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 RNF14Q9UBS8 474 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 BIRC5O15392 142 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 OAS1P00973 400 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 IGHMBP2P38935 993 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 HALP42357 657 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 TNNC1P63316 161 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 TEFQ10587 303 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 CUL1Q13616 776 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 AGGF1Q8N302 714 aaeCLIP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 PPFIBP2Q8ND30 876 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 CXorf38Q8TB03 319 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 DNAJC1Q96KC8 554 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 TUBGCP5Q96RT8 1024 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 TLR7Q9NYK1 1049 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 TDRKHQ9Y2W6 561 aaKnown RBP10.69□□□□□ -0.7
NFKB1-212ENST00000600343 ARL2BPQ9Y2Y0 163 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 MROH7Q68CQ1 1323 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 ADGRB3O60242 1522 aa10.69□□□□□ -0.7
NFKB1-212ENST00000600343 NUTM2BA6NNL0 878 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 NUTM2EB1AL46 878 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 KCNJ18B7U540 433 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 O00370 1275 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 IARSP41252 1262 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 OCRLQ01968 901 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 CYLC2Q14093 348 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 TTLL12Q14166 644 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms