RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 POTEGQ6S5H5 508 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 SV2BQ7L1I2 683 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
VRK3-218ENST00000600031 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 MMP19Q99542 508 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 RGL1Q9NZL6 768 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 TLL2Q9Y6L7 1015 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 E9PMD0 336 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 RPN1P04843 607 aaKnown RBP16.94■□□□□ 0.3
VRK3-218ENST00000600031 MYL1P05976 194 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 PGK2P07205 417 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 TNNT1P13805 278 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 GCLCP48506 637 aaPredicted RBP16.94■□□□□ 0.3
VRK3-218ENST00000600031 SHCBP1Q8NEM2 672 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 TSC1Q92574 1164 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 PARK7Q99497 189 aaKnown RBP16.94■□□□□ 0.3
VRK3-218ENST00000600031 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
VRK3-218ENST00000600031 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 ZMYND15Q9H091 742 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 STK24Q9Y6E0 443 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
VRK3-218ENST00000600031 KLRC4O43908 158 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 SLC10A3P09131 477 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 KCTD2Q14681 263 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 NLRX1Q86UT6 975 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 BPIFA3Q9BQP9 254 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 KIAA1217Q5T5P2 1943 aa16.94■□□□□ 0.3
VRK3-218ENST00000600031 DNAJC25-GNG10A0A024R161 153 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 MANSC4A6NHS7 340 aaPredicted RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 MYMKA6NI61 221 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 SLITRK3O94933 977 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 PSMC6P62333 389 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 STXBP2Q15833 593 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 TPD52L1Q16890 204 aaPredicted RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 ANKRD7Q92527 254 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 FGD4Q96M96 766 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 TBC1D22BQ9NU19 505 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 ADD3Q9UEY8 706 aaKnown RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 ZNFX1Q9P2E3 1918 aaKnown RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 STAM2O75886 525 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 FCER1AP12319 257 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 EDNRBP24530 442 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 CCNA1P78396 465 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 AMPD3Q01432 767 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 CTTNQ14247 550 aaKnown RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 SMAP1Q8IYB5 467 aaPredicted RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
VRK3-218ENST00000600031 C16orf45Q96MC5 204 aaPredicted RBP16.93■□□□□ 0.3
VRK3-218ENST00000600031 MAFGO15525 162 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 EIF3JO75822 258 aaKnown RBP16.92■□□□□ 0.3
VRK3-218ENST00000600031 PLA2G4BP0C869 781 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 GSDMDP57764 484 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 EPHA7Q15375 998 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 KMT5BQ4FZB7 885 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
VRK3-218ENST00000600031 MLKLQ8NB16 471 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
VRK3-218ENST00000600031 ABT1Q9ULW3 272 aaKnown RBP16.92■□□□□ 0.3
VRK3-218ENST00000600031 KCNA2P16389 499 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 TPH2Q8IWU9 490 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 IMPACTQ9P2X3 320 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 SPATA31C2B4DYI2 1134 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 SSBP05455 408 aaKnown RBP eCLIP16.91■□□□□ 0.3
VRK3-218ENST00000600031 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
VRK3-218ENST00000600031 ASIC1P78348 528 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 KCNB1Q14721 858 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 DYMQ7RTS9 669 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 PDCL2Q8N4E4 241 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 RMND1Q9NWS8 449 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 WRAP73Q9P2S5 460 aaPredicted RBP16.91■□□□□ 0.3
VRK3-218ENST00000600031 DNM3Q9UQ16 869 aa16.91■□□□□ 0.3
VRK3-218ENST00000600031 TMEM88BA6NKF7 163 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 CCNE2O96020 404 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 SLC12A3P55017 1021 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 NCAPHQ15003 741 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 DDX12PQ92771 950 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 KCND1Q9NSA2 647 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 TOMM70O94826 608 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 TPM4P67936 248 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 PDE4DQ08499 809 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 FAM110CQ1W6H9 321 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 ZNF658Q5TYW1 1059 aaPredicted RBP16.9■□□□□ 0.3
VRK3-218ENST00000600031 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 IFNL1Q8IU54 200 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 BANK1Q8NDB2 785 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 CDHR1Q96JP9 859 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 CPA4Q9UI42 421 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 GDAQ9Y2T3 454 aa16.9■□□□□ 0.3
VRK3-218ENST00000600031 PPP1R3GB7ZBB8 358 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms