RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 GNAT1P11488 350 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 AK2P54819 239 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 SETQ01105 290 aaPredicted RBP18.98■□□□□ 0.63
USHBP1-208ENST00000598309 TRIM71Q2Q1W2 868 aaKnown RBP18.98■□□□□ 0.63
USHBP1-208ENST00000598309 UTP14CQ5TAP6 766 aaKnown RBP18.98■□□□□ 0.63
USHBP1-208ENST00000598309 LRRC8DQ7L1W4 858 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 SERINC5Q86VE9 423 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 IGLV3-22A0A075B6J6 115 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 ADAMTS3O15072 1205 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 SEC24BO95487 1268 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 CKBP12277 381 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 ACTN1P12814 892 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 CIITAP33076 1130 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 NLRP5P59047 1200 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 ITGB3BPQ13352 177 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-208ENST00000598309 HIC1Q14526 733 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 GALNT17Q6IS24 598 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 Q7L0L9 218 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 OTOP2Q7RTS6 562 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 DAGLBQ8NCG7 672 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 C22orf23Q9BZE7 217 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 SMARCAD1Q9H4L7 1026 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 MTMR10Q9NXD2 777 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 ERAP1Q9NZ08 941 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 CXXC1Q9P0U4 656 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-208ENST00000598309 PCDHA4Q9UN74 947 aa18.97■□□□□ 0.63
USHBP1-208ENST00000598309 CAND2O75155 1236 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 LGR5O75473 907 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 ZNF200P98182 395 aaPredicted RBP18.96■□□□□ 0.63
USHBP1-208ENST00000598309 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 DEFB128Q7Z7B8 93 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 PLA2G4DQ86XP0 818 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 RASGRP4Q8TDF6 673 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 RNPEPQ9H4A4 650 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 NRCAMQ92823 1304 aa18.96■□□□□ 0.63
USHBP1-208ENST00000598309 ACTR2P61160 394 aa18.95■□□□□ 0.62
USHBP1-208ENST00000598309 LMBR1Q8WVP7 490 aa18.95■□□□□ 0.62
USHBP1-208ENST00000598309 GLG1Q92896 1179 aa18.95■□□□□ 0.62
USHBP1-208ENST00000598309 WNT8BQ93098 351 aa18.95■□□□□ 0.62
USHBP1-208ENST00000598309 IPO5O00410 1097 aaKnown RBP18.94■□□□□ 0.62
USHBP1-208ENST00000598309 BAIAP3O94812 1187 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 CXCL10P02778 98 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 DNAJB2P25686 324 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 USP11P51784 963 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 NEK4P51957 841 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 ADAM17P78536 824 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 RAB30Q15771 203 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 TRAF7Q6Q0C0 670 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 AZI2Q9H6S1 392 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 SETD4Q9NVD3 440 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 SLC4A7Q9Y6M7 1214 aa18.94■□□□□ 0.62
USHBP1-208ENST00000598309 M0R2N6 131 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 TREHO43280 583 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 ATG7O95352 703 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 XBP1P17861 261 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 PPFIA1Q13136 1202 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 GPNMBQ14956 572 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 NPY5RQ15761 445 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 ZNF618Q5T7W0 954 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 PLPPR4Q7Z2D5 763 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 BLIDQ8IZY5 108 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 TNPO1Q92973 898 aaKnown RBP18.93■□□□□ 0.62
USHBP1-208ENST00000598309 GTF3C6Q969F1 213 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 AIFM3Q96NN9 605 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 PCYT2Q99447 389 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 ZNF577Q9BSK1 485 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 FTOQ9C0B1 505 aaKnown RBP eCLIP18.93■□□□□ 0.62
USHBP1-208ENST00000598309 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 SCN5AQ14524 2016 aa18.93■□□□□ 0.62
USHBP1-208ENST00000598309 ZBBXA8MT70 800 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 DHX15O43143 795 aaKnown RBP18.92■□□□□ 0.62
USHBP1-208ENST00000598309 NBNO60934 754 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 CTDNEP1O95476 244 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 CCNE2O96020 404 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 MARK3P27448 753 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 THPOP40225 353 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 SLC26A2P50443 739 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 ME3Q16798 604 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 PRR16Q569H4 304 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 TAF2Q6P1X5 1199 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 WASF1Q92558 559 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 LENG9Q96B70 501 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 TIFAQ96CG3 184 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 GUCD1Q96NT3 240 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 SLC9A7Q96T83 725 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 PBX4Q9BYU1 374 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 TTYH1Q9H313 450 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-208ENST00000598309 SEMA6BQ9H3T3 888 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 STXBP5LQ9Y2K9 1186 aa18.92■□□□□ 0.62
USHBP1-208ENST00000598309 IGKV6D-21A0A0A0MT36 114 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 MBLAC1A4D2B0 266 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-208ENST00000598309 GRXCR1A8MXD5 290 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 RSPH10B2B2RC85 870 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 RSPH10BP0C881 870 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 MBTPS1Q14703 1052 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 GRIK4Q16099 956 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 CNKSR3Q6P9H4 555 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 RPAINQ86UA6 219 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 PHOSPHO2Q8TCD6 241 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms