RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MCF2L2Q86YR7 1114 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 MB21D1Q8N884 522 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 SYTL5Q8TDW5 730 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 PANX2Q96RD6 677 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 MXRA8Q9BRK3 442 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 TUBGCP2Q9BSJ2 902 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 ZNF577Q9BSK1 485 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 STK24Q9Y6E0 443 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 TRPM7Q96QT4 1865 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 FRMD3A2A2Y4 597 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 GAS7O60861 476 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 ZBED4O75132 1171 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 IREB2P48200 963 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 CTTNQ14247 550 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 CCDC65Q8IXS2 484 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 B4DLN1 442 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 SLITRK3O94933 977 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 GIT2Q14161 759 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 HERC4Q5GLZ8 1057 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 MYOCDQ8IZQ8 938 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 DYDC2Q96IM9 177 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 RIPK3Q9Y572 518 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 PHIPQ8WWQ0 1821 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 TMEM88BA6NKF7 163 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 PES1O00541 588 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 KRT18P05783 430 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 RPS6P62753 249 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 SETQ01105 290 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 MIIPQ5JXC2 388 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 MYRIPQ8NFW9 859 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 C12orf42Q96LP6 360 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 TRERF1Q96PN7 1200 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 TAAR1Q96RJ0 339 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 BHMT2Q9H2M3 363 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 UNC45AQ9H3U1 944 aa18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 CTDP1Q9Y5B0 961 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-216ENST00000598201 IPO5O00410 1097 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 HOXA7P31268 230 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 MTF1Q14872 753 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 ZCWPW2Q504Y3 356 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 B3GNT9Q6UX72 402 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 LRRC55Q6ZSA7 311 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 TOGARAM2Q6ZUX3 1019 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 FAM114A1Q8IWE2 563 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 TPH2Q8IWU9 490 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 REPS2Q8NFH8 660 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 PIGOQ8TEQ8 1089 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 PURBQ96QR8 312 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 REEP2Q9BRK0 252 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 RUSC1Q9BVN2 902 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 WDR11Q9BZH6 1224 aa18.92■□□□□ 0.62
SHKBP1-216ENST00000598201 ZBTB39O15060 712 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 EYA4O95677 639 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 TPM2P07951 284 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 APLP1P51693 650 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 MAP3K9P80192 1104 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 MRPS9P82933 396 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 LRRC63Q05C16 580 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 REXO1L1PQ8IX06 675 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 ZNF592Q92610 1267 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 ZHX3Q9H4I2 956 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 BCAS3Q9H6U6 928 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 TUFT1Q9NNX1 390 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 KCNH7Q9NS40 1196 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 PKD2L1Q9P0L9 805 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 WRAP73Q9P2S5 460 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 RABGAP1Q9Y3P9 1069 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 RLFQ13129 1914 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 A0A1W2PQC6 194 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 SOWAHDA6NJG2 315 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 NOL9Q5SY16 702 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 SCFD1Q8WVM8 642 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 POLD4Q9HCU8 107 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 AFG3L2Q9Y4W6 797 aa18.91■□□□□ 0.62
SHKBP1-216ENST00000598201 RSPH10B2B2RC85 870 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 C19orf81C9J6K1 198 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 RIOK3O14730 519 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 RSPH10BP0C881 870 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 EIF2AK2P19525 551 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 DNM2P50570 870 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 CASP5P51878 434 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 LDLRAD1Q5T700 205 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 PCNX4Q63HM2 1172 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 CNGA4Q8IV77 575 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 NELFCDQ8IXH7 590 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 ANKRD13AQ8IZ07 590 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 NOC4LQ9BVI4 516 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 TEKT3Q9BXF9 490 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 PPP2R2CQ9Y2T4 447 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 UBIAD1Q9Y5Z9 338 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 PAPPA2Q9BXP8 1791 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 FRMPD4Q14CM0 1322 aa18.9■□□□□ 0.62
SHKBP1-216ENST00000598201 DDX39AO00148 427 aaKnown RBP18.89■□□□□ 0.62
SHKBP1-216ENST00000598201 FDX1P10109 184 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms