RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 LETM2Q2VYF4 491 aa20.53■□□□□ 0.88
IRF3-216ENST00000597180 FAM47CQ5HY64 1035 aa20.53■□□□□ 0.88
IRF3-216ENST00000597180 PPP4R3AQ6IN85 833 aa20.53■□□□□ 0.88
IRF3-216ENST00000597180 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
IRF3-216ENST00000597180 NAP1L4Q99733 375 aaKnown RBP20.53■□□□□ 0.88
IRF3-216ENST00000597180 TUT1Q9H6E5 874 aaKnown RBP20.53■□□□□ 0.88
IRF3-216ENST00000597180 PRDM5Q9NQX1 630 aaPredicted RBP20.53■□□□□ 0.88
IRF3-216ENST00000597180 TMEM39AQ9NV64 488 aa20.53■□□□□ 0.88
IRF3-216ENST00000597180 EMSYQ7Z589 1322 aa20.53■□□□□ 0.88
IRF3-216ENST00000597180 LGR5O75473 907 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 CCNE2O96020 404 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 GJB2P29033 226 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 UTP14CQ5TAP6 766 aaKnown RBP20.52■□□□□ 0.88
IRF3-216ENST00000597180 PPP1R13LQ8WUF5 828 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 SLC5A5Q92911 643 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 SNX21Q969T3 373 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 RIT2Q99578 217 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 TRPV6Q9H1D0 765 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 FOXP1Q9H334 677 aaPredicted RBP20.52■□□□□ 0.88
IRF3-216ENST00000597180 DDX25Q9UHL0 483 aaKnown RBP20.52■□□□□ 0.88
IRF3-216ENST00000597180 GTF2IRD1Q9UHL9 959 aa20.52■□□□□ 0.88
IRF3-216ENST00000597180 ZNF215Q9UL58 517 aaPredicted RBP20.52■□□□□ 0.88
IRF3-216ENST00000597180 SUPT20HL2P0C7V6 817 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 ZNF746Q6NUN9 644 aaPredicted RBP20.51■□□□□ 0.87
IRF3-216ENST00000597180 TRIM50Q86XT4 487 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 C7orf31Q8N865 590 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 ETNPPLQ8TBG4 499 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 UIMC1Q96RL1 719 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 PCYT2Q99447 389 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 TRMT13Q9NUP7 481 aaKnown RBP20.51■□□□□ 0.87
IRF3-216ENST00000597180 HDAC6Q9UBN7 1215 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 SMC3Q9UQE7 1217 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 TANC1Q9C0D5 1861 aa20.51■□□□□ 0.87
IRF3-216ENST00000597180 IGKV6D-21A0A0A0MT36 114 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 K7ELQ4 463 aaPredicted RBP20.5■□□□□ 0.87
IRF3-216ENST00000597180 DDX39AO00148 427 aaKnown RBP20.5■□□□□ 0.87
IRF3-216ENST00000597180 SLC37A4O43826 429 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 ITGB8P26012 769 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 HOXC8P31273 242 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 KRT76Q01546 638 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 ABHD15Q6UXT9 468 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 GDF15Q99988 308 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 SMARCAD1Q9H4L7 1026 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 KCNMB3Q9NPA1 279 aa20.5■□□□□ 0.87
IRF3-216ENST00000597180 CCNT1O60563 726 aaKnown RBP20.49■□□□□ 0.87
IRF3-216ENST00000597180 PSMD10O75832 226 aa20.49■□□□□ 0.87
IRF3-216ENST00000597180 MAGEA10P43363 369 aaPredicted RBP20.49■□□□□ 0.87
IRF3-216ENST00000597180 LRCH2Q5VUJ6 765 aa20.49■□□□□ 0.87
IRF3-216ENST00000597180 GDF6Q6KF10 455 aaPredicted RBP20.49■□□□□ 0.87
IRF3-216ENST00000597180 SMAP1Q8IYB5 467 aaPredicted RBP20.49■□□□□ 0.87
IRF3-216ENST00000597180 PRO3102Q9H379 93 aa20.49■□□□□ 0.87
IRF3-216ENST00000597180 ERAP1Q9NZ08 941 aa20.49■□□□□ 0.87
IRF3-216ENST00000597180 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
IRF3-216ENST00000597180 TBX3O15119 743 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 GAS7O60861 476 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 TIMP1P01033 207 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 SMIM10L2AP0DMW4 78 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 SMIM10L2BP0DMW5 78 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 RAG1P15918 1043 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.87
IRF3-216ENST00000597180 PTGISQ16647 500 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 PLPPR4Q7Z2D5 763 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 GLG1Q92896 1179 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 INTS4Q96HW7 963 aaKnown RBP20.48■□□□□ 0.87
IRF3-216ENST00000597180 CTAGE1Q96RT6 745 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 LBHD1Q9BQE6 289 aaPredicted RBP20.48■□□□□ 0.87
IRF3-216ENST00000597180 NOC4LQ9BVI4 516 aaKnown RBP20.48■□□□□ 0.87
IRF3-216ENST00000597180 TEKT3Q9BXF9 490 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 TCEAL9Q9UHQ7 104 aa20.48■□□□□ 0.87
IRF3-216ENST00000597180 KIF28PB7ZC32 967 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 BMP8BP34820 402 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 MDM2Q00987 491 aaPredicted RBP20.47■□□□□ 0.87
IRF3-216ENST00000597180 HIC1Q14526 733 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 MIS18BP1Q6P0N0 1132 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 B3GNT9Q6UX72 402 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 NOSTRINQ8IVI9 506 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 AFAP1L1Q8TED9 768 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 BADQ92934 168 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 GJA10Q969M2 543 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 FAM20AQ96MK3 541 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 RNPEPQ9H4A4 650 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 AZI2Q9H6S1 392 aa20.47■□□□□ 0.87
IRF3-216ENST00000597180 WDR64B1ANS9 1081 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 WNT7AO00755 349 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 CYP2C9P11712 490 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 SLC26A2P50443 739 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 STAT5BP51692 787 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 CHRDL2Q6WN34 429 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 CCDC60Q8IWA6 550 aaPredicted RBP20.46■□□□□ 0.87
IRF3-216ENST00000597180 HAS1Q92839 578 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 HIPK3Q9H422 1215 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 PCDHA10Q9Y5I2 948 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 SCN5AQ14524 2016 aa20.46■□□□□ 0.87
IRF3-216ENST00000597180 C17orf102A2RUQ5 167 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 PSAPP07602 524 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 MARK3P27448 753 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 SFNP31947 248 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 GNL2Q13823 731 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms