RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SP2Q02086 613 aa18.07■□□□□ 0.48
LIG1-214ENST00000597146 GPKOWQ92917 476 aaPredicted RBP eCLIP18.07■□□□□ 0.48
LIG1-214ENST00000597146 TUT1Q9H6E5 874 aaKnown RBP18.07■□□□□ 0.48
LIG1-214ENST00000597146 NCOR2Q9Y618 2525 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 CCDC171Q6TFL3 1326 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
LIG1-214ENST00000597146 SP100P23497 879 aaPredicted RBP18.06■□□□□ 0.48
LIG1-214ENST00000597146 FRMD5Q7Z6J6 570 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 SPPL3Q8TCT6 385 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
LIG1-214ENST00000597146 RIPOR3Q96MK2 946 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 BCAS3Q9H6U6 928 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 TCP11L1Q9NUJ3 509 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 SETD4Q9NVD3 440 aa18.06■□□□□ 0.48
LIG1-214ENST00000597146 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 ZBTB33Q86T24 672 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 MCF2L2Q86YR7 1114 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 TMEM105Q8N8V8 129 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 KLHL23Q8NBE8 558 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 POF1BQ8WVV4 589 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 SUSD6Q92537 303 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 P2RX5Q93086 422 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 DCTPP1Q9H773 170 aa18.05■□□□□ 0.48
LIG1-214ENST00000597146 KMT2BQ9UMN6 2715 aaPredicted RBP18.04■□□□□ 0.48
LIG1-214ENST00000597146 DGKIO75912 1065 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 CFBP00751 764 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 CHRNA1P02708 482 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 GPATCH4Q5T3I0 446 aaKnown RBP18.04■□□□□ 0.48
LIG1-214ENST00000597146 TRIM50Q86XT4 487 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 LINC01599Q8WXQ3 324 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 PDCD2LQ9BRP1 358 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 MAF1Q9H063 256 aa18.04■□□□□ 0.48
LIG1-214ENST00000597146 EP300Q09472 2414 aaPredicted RBP18.04■□□□□ 0.48
LIG1-214ENST00000597146 ENPP3O14638 875 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 OPLAHO14841 1288 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 PER2O15055 1255 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 HSPD1P10809 573 aaKnown RBP18.03■□□□□ 0.48
LIG1-214ENST00000597146 ATF7P17544 494 aaPredicted RBP18.03■□□□□ 0.48
LIG1-214ENST00000597146 NUBP1P53384 320 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 ARHGAP4P98171 946 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 LPIN1Q14693 890 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 PAN2Q504Q3 1202 aaKnown RBP18.03■□□□□ 0.48
LIG1-214ENST00000597146 ADGRF4Q8IZF3 695 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 ADSSL1Q8N142 457 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 LMBR1Q8WVP7 490 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 MLXIPQ9HAP2 919 aa18.03■□□□□ 0.48
LIG1-214ENST00000597146 FNDC1Q4ZHG4 1894 aaPredicted RBP18.03■□□□□ 0.48
LIG1-214ENST00000597146 MED19A0JLT2 244 aaPredicted RBP18.02■□□□□ 0.48
LIG1-214ENST00000597146 RUFY4Q6ZNE9 571 aa18.02■□□□□ 0.48
LIG1-214ENST00000597146 PI4K2BQ8TCG2 481 aa18.02■□□□□ 0.48
LIG1-214ENST00000597146 NKD2Q969F2 451 aaPredicted RBP18.02■□□□□ 0.48
LIG1-214ENST00000597146 ZKSCAN3Q9BRR0 538 aa18.02■□□□□ 0.48
LIG1-214ENST00000597146 TLE6Q9H808 572 aa18.02■□□□□ 0.48
LIG1-214ENST00000597146 EHMT1Q9H9B1 1298 aa18.02■□□□□ 0.48
LIG1-214ENST00000597146 MRPL11Q9Y3B7 192 aaKnown RBP18.02■□□□□ 0.48
LIG1-214ENST00000597146 PCDHB15Q9Y5E8 787 aa18.02■□□□□ 0.48
LIG1-214ENST00000597146 LAMA4Q16363 1823 aa18.02■□□□□ 0.47
LIG1-214ENST00000597146 FRYLO94915 3013 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 HSD17B4P51659 736 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 HAND2P61296 217 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 ADAM17P78536 824 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 PGM5Q15124 567 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 KCNV1Q6PIU1 500 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 APOL5Q9BWW9 433 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 SMOC2Q9H3U7 446 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 TELO2Q9Y4R8 837 aa18.01■□□□□ 0.47
LIG1-214ENST00000597146 NOP56O00567 594 aaKnown RBP18■□□□□ 0.47
LIG1-214ENST00000597146 PPFIA3O75145 1194 aa18■□□□□ 0.47
LIG1-214ENST00000597146 GNAT1P11488 350 aa18■□□□□ 0.47
LIG1-214ENST00000597146 GATMP50440 423 aa18■□□□□ 0.47
LIG1-214ENST00000597146 MGAT3Q09327 533 aa18■□□□□ 0.47
LIG1-214ENST00000597146 NAALADL2Q58DX5 795 aa18■□□□□ 0.47
LIG1-214ENST00000597146 CMTR2Q8IYT2 770 aaKnown RBP18■□□□□ 0.47
LIG1-214ENST00000597146 KREMEN2Q8NCW0 462 aa18■□□□□ 0.47
LIG1-214ENST00000597146 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
LIG1-214ENST00000597146 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
LIG1-214ENST00000597146 DHX16O60231 1041 aaKnown RBP17.99■□□□□ 0.47
LIG1-214ENST00000597146 HOXA13P31271 388 aaPredicted RBP17.99■□□□□ 0.47
LIG1-214ENST00000597146 ANKRD45Q5TZF3 282 aa17.99■□□□□ 0.47
LIG1-214ENST00000597146 VSIG10LQ86VR7 867 aa17.99■□□□□ 0.47
LIG1-214ENST00000597146 TTC14Q96N46 770 aa17.99■□□□□ 0.47
LIG1-214ENST00000597146 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
LIG1-214ENST00000597146 VAT1LQ9HCJ6 419 aa17.99■□□□□ 0.47
LIG1-214ENST00000597146 CDH22Q9UJ99 828 aa17.99■□□□□ 0.47
LIG1-214ENST00000597146 CEP250Q9BV73 2442 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 KRT37O76014 449 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 BRD1O95696 1058 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 FGAP02671 866 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 ALX1Q15699 326 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 DUSP6Q16828 381 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 FBXO47Q5MNV8 452 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
LIG1-214ENST00000597146 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 CRIPAKQ8N1N5 446 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 MICAL1Q8TDZ2 1067 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 AGO3Q9H9G7 860 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms