RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
LIG1-212ENST00000596549 MSRAQ9UJ68 235 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 EMSYQ7Z589 1322 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 ESYT2A0FGR8 921 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 BAIAP3O94812 1187 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 ARHGEF15O94989 841 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 PSMA5P28066 241 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 WDR5P61964 334 aaKnown RBP14.93□□□□□ -0.02
LIG1-212ENST00000596549 DEFB103AP81534 67 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 CNKSR3Q6P9H4 555 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 TEX2Q8IWB9 1127 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 USP38Q8NB14 1042 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 GIMAP8Q8ND71 665 aaPredicted RBP14.93□□□□□ -0.02
LIG1-212ENST00000596549 ATP6V0A1Q93050 837 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 OSBPL7Q9BZF2 842 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 PRDM12Q9H4Q4 367 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 EHMT1Q9H9B1 1298 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 ZSWIM6Q9HCJ5 1215 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 KCNH7Q9NS40 1196 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 SETD4Q9NVD3 440 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 PPP4R2Q9NY27 417 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 ZNF215Q9UL58 517 aaPredicted RBP14.93□□□□□ -0.02
LIG1-212ENST00000596549 PCDHA11Q9Y5I1 949 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 RALGAPA2Q2PPJ7 1873 aa14.93□□□□□ -0.02
LIG1-212ENST00000596549 MYH9P35579 1960 aaKnown RBP14.93□□□□□ -0.02
LIG1-212ENST00000596549 REV3LO60673 3130 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 KIAA1671Q9BY89 1806 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 CCDC196A0A1B0GTZ2 297 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 PRPF3O43395 683 aaKnown RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 ARP10275 920 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 ITGB3BPQ13352 177 aaPredicted RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 ADGRE1Q14246 886 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 PPP2R2DQ66LE6 453 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 TMCO2Q7Z6W1 182 aaPredicted RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 PCYT2Q99447 389 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 RNF26Q9BY78 433 aaPredicted RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 UPF3BQ9BZI7 483 aaKnown RBP14.92□□□□□ -0.02
LIG1-212ENST00000596549 ZMYND12Q9H0C1 365 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 COL4A6Q14031 1691 aa14.92□□□□□ -0.02
LIG1-212ENST00000596549 IGLV3-22A0A075B6J6 115 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 FAM86B1E9PN63 330 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 PARNO95453 639 aaKnown RBP14.91□□□□□ -0.02
LIG1-212ENST00000596549 FOSP01100 380 aaPredicted RBP14.91□□□□□ -0.02
LIG1-212ENST00000596549 CA3P07451 260 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 CTSHP09668 335 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 FAM86B2P0C5J1 330 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 MARK3P27448 753 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 THPOP40225 353 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 CCT2P78371 535 aaKnown RBP14.91□□□□□ -0.02
LIG1-212ENST00000596549 ARHGAP4P98171 946 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 SPRED2Q7Z698 418 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 HERC6Q8IVU3 1022 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIG1-212ENST00000596549 SEPT1Q8WYJ6 367 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 SLC28A3Q9HAS3 691 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 AGO4Q9HCK5 861 aaKnown RBP14.91□□□□□ -0.02
LIG1-212ENST00000596549 JPH1Q9HDC5 661 aaPredicted RBP14.91□□□□□ -0.02
LIG1-212ENST00000596549 NFASCO94856 1347 aa14.91□□□□□ -0.02
LIG1-212ENST00000596549 MAFGO15525 162 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 LGR5O75473 907 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 IFNAR1P17181 557 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 CEP55Q53EZ4 464 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 RUFY4Q6ZNE9 571 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 PHOSPHO2Q8TCD6 241 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 RASGRP4Q8TDF6 673 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 LARP6Q9BRS8 491 aaKnown RBP14.9□□□□□ -0.02
LIG1-212ENST00000596549 SLC26A6Q9BXS9 759 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 TM6SF1Q9BZW5 370 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 VPS54Q9P1Q0 977 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 SLC9A2Q9UBY0 812 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 NRCAMQ92823 1304 aa14.9□□□□□ -0.02
LIG1-212ENST00000596549 TRANK1O15050 2925 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 LCHNA4D1U4 455 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 RSPH10B2B2RC85 870 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 MEIS1O00470 390 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 RSPH10BP0C881 870 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 KCNJ6P48051 423 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 REXO1Q8N1G1 1221 aaKnown RBP14.89□□□□□ -0.03
LIG1-212ENST00000596549 GLT8D2Q9H1C3 349 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 ERAP1Q9NZ08 941 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
LIG1-212ENST00000596549 EVPLQ92817 2033 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 EPOPA6NHQ4 379 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 DDX39AO00148 427 aaKnown RBP14.88□□□□□ -0.03
LIG1-212ENST00000596549 DLL1O00548 723 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 EDIL3O43854 480 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 CAND2O75155 1236 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 CCNE2O96020 404 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 CYP3A4P08684 503 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 ACTR2P61160 394 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 TAP1Q03518 808 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 MGAT3Q09327 533 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 PPFIA1Q13136 1202 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 GRIK4Q16099 956 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 PLEKHG4Q58EX7 1191 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms