RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 GJA10Q969M2 543 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 FERMT2Q96AC1 680 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 MTMR9Q96QG7 549 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 MTG1Q9BT17 334 aaPredicted RBP9.44□□□□□ -0.9
VRK3-211ENST00000596445 SENP6Q9GZR1 1112 aaPredicted RBP9.44□□□□□ -0.9
VRK3-211ENST00000596445 TMEM60Q9H2L4 133 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 C11orf49Q9H6J7 331 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
VRK3-211ENST00000596445 TELO2Q9Y4R8 837 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 ELP1O95163 1332 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 KAT6AQ92794 2004 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 LAD1O00515 517 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 LGR5O75473 907 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 BRD1O95696 1058 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 BMP15O95972 392 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 F13A1P00488 732 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 F2P00734 622 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 LGALS2P05162 132 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 OR52Z1P0C646 297 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 SFNP31947 248 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 TCF7P36402 384 aaPredicted RBP9.43□□□□□ -0.9
VRK3-211ENST00000596445 JAK3P52333 1124 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 PTGDRQ13258 359 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 PPP2R5CQ13362 524 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
VRK3-211ENST00000596445 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 B3GNT9Q6UX72 402 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 ABHD15Q6UXT9 468 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 C4orf32Q8N8J7 132 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 RDM1Q8NG50 284 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
VRK3-211ENST00000596445 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 GLT1D1Q96MS3 346 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 C16orf70Q9BSU1 422 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 KATNAL1Q9BW62 490 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 UNC45AQ9H3U1 944 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 VAV3Q9UKW4 847 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 PCDHA12Q9UN75 941 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 PCDHA10Q9Y5I2 948 aa9.43□□□□□ -0.9
VRK3-211ENST00000596445 EMSYQ7Z589 1322 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 IGKV6D-21A0A0A0MT36 114 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
VRK3-211ENST00000596445 H3BRB1 525 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 CHMP2AO43633 222 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 PSAPP07602 524 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 SUPT20HL2P0C7V6 817 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 DDIT3P35638 169 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 PRPHP41219 470 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 TXKP42681 527 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 ATP2C1P98194 919 aaPredicted RBP9.42□□□□□ -0.9
VRK3-211ENST00000596445 SPIRE1Q08AE8 756 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 UTP14CQ5TAP6 766 aaKnown RBP9.42□□□□□ -0.9
VRK3-211ENST00000596445 FAM173BQ6P4H8 233 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 SLC39A5Q6ZMH5 540 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 MIER3Q7Z3K6 550 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 KAT2BQ92831 832 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 PCYT2Q99447 389 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 SEZ6LQ9BYH1 1024 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 SMARCAD1Q9H4L7 1026 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 TUT1Q9H6E5 874 aaKnown RBP9.42□□□□□ -0.9
VRK3-211ENST00000596445 AZI2Q9H6S1 392 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
VRK3-211ENST00000596445 STARD7Q9NQZ5 370 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 DISC1Q9NRI5 854 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 ZNF215Q9UL58 517 aaPredicted RBP9.42□□□□□ -0.9
VRK3-211ENST00000596445 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 ZDHHC9Q9Y397 364 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 SAMM50Q9Y512 469 aa9.42□□□□□ -0.9
VRK3-211ENST00000596445 TRIP12Q14669 1992 aaPredicted RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 TCHHQ07283 1943 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 ALPK3Q96L96 1907 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 GRIN2DO15399 1336 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 ARVCFO00192 962 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 HAS3O00219 553 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 BACH1O14867 736 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 CAPN15O75808 1086 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 RGS19P49795 217 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 PSEN2P49810 448 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 SLC26A2P50443 739 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 CDK7P50613 346 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
VRK3-211ENST00000596445 STAT5BP51692 787 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 PSMC6P62333 389 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 NUCB2P80303 420 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 ITGA7Q13683 1181 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 MFSD10Q14728 455 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 SNX17Q15036 470 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 SF3A1Q15459 793 aaKnown RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 KIAA0753Q2KHM9 967 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 TMEM266Q2M3C6 531 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 C1orf53Q5VUE5 145 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 FAM160B1Q5W0V3 765 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 ARL6IP4Q66PJ3 421 aaKnown RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 SWSAP1Q6NVH7 229 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 NFRKBQ6P4R8 1299 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms