RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 PRO3102Q9H379 93 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 H3BRB1 525 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 TLR3O15455 904 aaKnown RBP17■□□□□ 0.31
SCN1B-204ENST00000596348 SLC37A4O43826 429 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 MDM2Q00987 491 aaPredicted RBP17■□□□□ 0.31
SCN1B-204ENST00000596348 HIC1Q14526 733 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 LETM2Q2VYF4 491 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 Q4G0T1 1027 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 GDF6Q6KF10 455 aaPredicted RBP17■□□□□ 0.31
SCN1B-204ENST00000596348 MOXD1Q6UVY6 613 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 NEK8Q86SG6 692 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 SESTD1Q86VW0 696 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 GJA10Q969M2 543 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 TUT1Q9H6E5 874 aaKnown RBP17■□□□□ 0.31
SCN1B-204ENST00000596348 HDAC6Q9UBN7 1215 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 WDR81Q562E7 1941 aa17■□□□□ 0.31
SCN1B-204ENST00000596348 WNT7AO00755 349 aa16.99■□□□□ 0.31
SCN1B-204ENST00000596348 CYP2C9P11712 490 aa16.99■□□□□ 0.31
SCN1B-204ENST00000596348 PTPN11Q06124 597 aaPredicted RBP16.99■□□□□ 0.31
SCN1B-204ENST00000596348 SLC5A5Q92911 643 aa16.99■□□□□ 0.31
SCN1B-204ENST00000596348 GTF2IRD1Q9UHL9 959 aa16.99■□□□□ 0.31
SCN1B-204ENST00000596348 COLQQ9Y215 455 aaPredicted RBP16.99■□□□□ 0.31
SCN1B-204ENST00000596348 LAMA2P24043 3122 aaKnown RBP16.99■□□□□ 0.31
SCN1B-204ENST00000596348 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
SCN1B-204ENST00000596348 UMODL1Q5DID0 1318 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 LGR5O75473 907 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 ATG7O95352 703 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 CUL4AQ13619 759 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 C7orf31Q8N865 590 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 ETNPPLQ8TBG4 499 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 BADQ92934 168 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
SCN1B-204ENST00000596348 PPP1R12CQ9BZL4 782 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 TBC1D22BQ9NU19 505 aa16.98■□□□□ 0.31
SCN1B-204ENST00000596348 DDX25Q9UHL0 483 aaKnown RBP16.98■□□□□ 0.31
SCN1B-204ENST00000596348 EMSYQ7Z589 1322 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 MYH9P35579 1960 aaKnown RBP16.97■□□□□ 0.31
SCN1B-204ENST00000596348 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 TIMP1P01033 207 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 SMIM10L2AP0DMW4 78 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 SMIM10L2BP0DMW5 78 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 RAG1P15918 1043 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 GJB2P29033 226 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 HOXC8P31273 242 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 ZNF200P98182 395 aaPredicted RBP16.97■□□□□ 0.31
SCN1B-204ENST00000596348 SAFBQ15424 915 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCN1B-204ENST00000596348 PTGISQ16647 500 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 PPP4R3AQ6IN85 833 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 ABHD15Q6UXT9 468 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 LBHD1Q9BQE6 289 aaPredicted RBP16.97■□□□□ 0.31
SCN1B-204ENST00000596348 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 RNPEPQ9H4A4 650 aa16.97■□□□□ 0.31
SCN1B-204ENST00000596348 ZNF215Q9UL58 517 aaPredicted RBP16.97■□□□□ 0.31
SCN1B-204ENST00000596348 IGKV6D-21A0A0A0MT36 114 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 CCNT1O60563 726 aaKnown RBP16.96■□□□□ 0.31
SCN1B-204ENST00000596348 GAS7O60861 476 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 PSMD10O75832 226 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 SUPT20HL2P0C7V6 817 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 GCFC2P16383 781 aaKnown RBP16.96■□□□□ 0.31
SCN1B-204ENST00000596348 MARK3P27448 753 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 CYP2C18P33260 490 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 ZNF746Q6NUN9 644 aaPredicted RBP16.96■□□□□ 0.31
SCN1B-204ENST00000596348 CCDC60Q8IWA6 550 aaPredicted RBP16.96■□□□□ 0.31
SCN1B-204ENST00000596348 DHX38Q92620 1227 aaKnown RBP16.96■□□□□ 0.31
SCN1B-204ENST00000596348 GLG1Q92896 1179 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 RIT2Q99578 217 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 WNT8AQ9H1J5 351 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.31
SCN1B-204ENST00000596348 SMARCAD1Q9H4L7 1026 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 KCNMB3Q9NPA1 279 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 SMC3Q9UQE7 1217 aa16.96■□□□□ 0.31
SCN1B-204ENST00000596348 EPHB4P54760 987 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 KRT76Q01546 638 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 HAS1Q92839 578 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 WNT8BQ93098 351 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 UNC45AQ9H3U1 944 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 SETD4Q9NVD3 440 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 ERAP1Q9NZ08 941 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 TANC1Q9C0D5 1861 aa16.95■□□□□ 0.3
SCN1B-204ENST00000596348 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
SCN1B-204ENST00000596348 BMP8BP34820 402 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 STAT5BP51692 787 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 NOSTRINQ8IVI9 506 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 LMBR1Q8WVP7 490 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 SNX21Q969T3 373 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 TEKT3Q9BXF9 490 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 AZI2Q9H6S1 392 aa16.94■□□□□ 0.3
SCN1B-204ENST00000596348 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms