RNA–Protein interactions for RNA: ENST00000596319.1

SAMD4B-205, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 2

Gene SAMD4B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-205ENST00000596319 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 CCDC69A6NI79 296 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 STX6O43752 255 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 SORBS3O60504 671 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 LGALS2P05162 132 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 PDCP20941 246 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 KCNJ6P48051 423 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 TAP1Q03518 808 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 ZNF618Q5T7W0 954 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 SERINC5Q86VE9 423 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 SMARCC2Q8TAQ2 1214 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 WNT8BQ93098 351 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 BCAS3Q9H6U6 928 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 THEGQ9P2T0 379 aa11.98□□□□□ -0.49
SAMD4B-205ENST00000596319 NOP56O00567 594 aaKnown RBP11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 TLL1O43897 1013 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 SMIM10L2AP0DMW4 78 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 SMIM10L2BP0DMW5 78 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 CCDC85BQ15834 202 aaPredicted RBP11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 CYFIP1Q7L576 1253 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 NLRX1Q86UT6 975 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 ASB2Q96Q27 587 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 GPR20Q99678 358 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
SAMD4B-205ENST00000596319 KAT6AQ92794 2004 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 EMSYQ7Z589 1322 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 C17orf102A2RUQ5 167 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 CAND2O75155 1236 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 LGR5O75473 907 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 LARGE1O95461 756 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 F13A1P00488 732 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 CPA1P15085 419 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 SYT1P21579 422 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 GJB2P29033 226 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 MRPS5P82675 430 aaKnown RBP11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 IKBKEQ14164 716 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 MBTPS1Q14703 1052 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 ME3Q16798 604 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 TCTN1Q2MV58 587 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 FANCBQ8NB91 859 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 GPRASP2Q96D09 838 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 CDHR1Q96JP9 859 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 RNPEPQ9H4A4 650 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 MTCH2Q9Y6C9 303 aa11.96□□□□□ -0.49
SAMD4B-205ENST00000596319 PTPRSQ13332 1948 aa11.96□□□□□ -0.5
SAMD4B-205ENST00000596319 BRWD1Q9NSI6 2320 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 EPOPA6NHQ4 379 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 RSPH10B2B2RC85 870 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 RFXAPO00287 272 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 TREHO43280 583 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 GJB5O95377 273 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 RSPH10BP0C881 870 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 GNAT1P11488 350 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 RXRAP19793 462 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 THPOP40225 353 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 ADAM17P78536 824 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 DEFB103AP81534 67 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 ZSCAN23Q3MJ62 389 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 CMTR1Q8N1G2 835 aaKnown RBP11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 GPT2Q8TD30 523 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 ARNTL2Q8WYA1 636 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 RAD9AQ99638 391 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 LRRC2Q9BYS8 371 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 CERS4Q9HA82 394 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 TPCN1Q9ULQ1 816 aa11.95□□□□□ -0.5
SAMD4B-205ENST00000596319 DOCK5Q9H7D0 1870 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 LCHNA4D1U4 455 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 MAFGO15525 162 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 PLEKHG4Q58EX7 1191 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 SYNE3Q6ZMZ3 975 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 DBF4BQ8NFT6 615 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 SETD4Q9NVD3 440 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 LMCD1Q9NZU5 365 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 UBIAD1Q9Y5Z9 338 aa11.94□□□□□ -0.5
SAMD4B-205ENST00000596319 TRANK1O15050 2925 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms