RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 GLG1Q92896 1179 aa11.79□□□□□ -0.52
SHKBP1-210ENST00000595874 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
SHKBP1-210ENST00000595874 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
SHKBP1-210ENST00000595874 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
SHKBP1-210ENST00000595874 RSPH10B2B2RC85 870 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 TLL1O43897 1013 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 STAM2O75886 525 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 UPP2O95045 317 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 REC8O95072 547 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 CSPG5O95196 566 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 RSPH10BP0C881 870 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 SCG2P13521 617 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 TMEM62Q0P6H9 643 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 CNKSR3Q6P9H4 555 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 DBF4BQ8NFT6 615 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 LMBR1Q8WVP7 490 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 KCNB2Q92953 911 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 GPRASP2Q96D09 838 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 PPP1R16BQ96T49 567 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 MXRA8Q9BRK3 442 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 FAM49AQ9H0Q0 323 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 ZNF215Q9UL58 517 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
SHKBP1-210ENST00000595874 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.52
SHKBP1-210ENST00000595874 PFKMP08237 780 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 FOSBP53539 338 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 PPFIA1Q13136 1202 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 SKIV2LQ15477 1246 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 PKN1Q16512 942 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 PFKFB3Q16875 520 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 SEPT1Q8WYJ6 367 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 GJA10Q969M2 543 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 PCYT2Q99447 389 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 USP26Q9BXU7 913 aa11.77□□□□□ -0.53
SHKBP1-210ENST00000595874 TMEM265A0A087WTH1 108 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 LGR5O75473 907 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 PSMA5P28066 241 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 PDIA3P30101 505 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 ITGB3BPQ13352 177 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 GRIK4Q16099 956 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 XRRA1Q6P2D8 792 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 SERINC5Q86VE9 423 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 GDPD5Q8WTR4 605 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 DNAJB3Q8WWF6 145 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 SLC9A7Q96T83 725 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 COL25A1Q9BXS0 654 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 AGO4Q9HCK5 861 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 JPH1Q9HDC5 661 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 KCNH7Q9NS40 1196 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 SLC9A2Q9UBY0 812 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
SHKBP1-210ENST00000595874 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 SIP14410 1827 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 COL6A3P12111 3177 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 GHRP10912 638 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 ACTR2P61160 394 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 TAP1Q03518 808 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 IKBKEQ14164 716 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 PDRG1Q9NUG6 133 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
SHKBP1-210ENST00000595874 KIF28PB7ZC32 967 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 BACH1O14867 736 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 BAIAP3O94812 1187 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 CXCL10P02778 98 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 INSRRP14616 1297 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 NLRP5P59047 1200 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 CEP55Q53EZ4 464 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 PRR16Q569H4 304 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 CDHR1Q96JP9 859 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 AZI2Q9H6S1 392 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 GINS2Q9Y248 185 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 KAT6AQ92794 2004 aa11.74□□□□□ -0.53
SHKBP1-210ENST00000595874 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 CHMP2AO43633 222 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 CCNE2O96020 404 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 FOSP01100 380 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 CHRNA1P02708 482 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms