RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 STAT3P40763 770 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 ATP1A2P50993 1020 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 ADCY7P51828 1080 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 ITIH3Q06033 890 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 EHHADHQ08426 723 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 ZNF543Q08ER8 600 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 SEPT2Q15019 361 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 PTPROQ16827 1216 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
ZNF541-205ENST00000595558 KLRC1P26715 233 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 PPP1R2P41236 205 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
ZNF541-205ENST00000595558 GUCY2FP51841 1108 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 EPHB4P54760 987 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 POLR2FP61218 127 aaKnown RBP16.89■□□□□ 0.29
ZNF541-205ENST00000595558 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 PDCLQ13371 301 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 AOC3Q16853 763 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 USH1GQ495M9 461 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 TTC31Q49AM3 519 aaPredicted RBP16.89■□□□□ 0.29
ZNF541-205ENST00000595558 NOX5Q96PH1 765 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 TDRD3Q9H7E2 651 aaKnown RBP16.89■□□□□ 0.29
ZNF541-205ENST00000595558 TRAF5O00463 557 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 PAFAH1B1P43034 410 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
ZNF541-205ENST00000595558 FAM83BQ5T0W9 1011 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 SIAH1Q8IUQ4 282 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 PROCA1Q8NCQ7 364 aaPredicted RBP16.88■□□□□ 0.29
ZNF541-205ENST00000595558 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 GOLPH3Q9H4A6 298 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 EPB41L5Q9HCM4 733 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 IGKV6D-41A0A0C4DH26 115 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 GUCY2DQ02846 1103 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 LRRC63Q05C16 580 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 COASYQ13057 564 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 TBC1D5Q92609 795 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 HAS1Q92839 578 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 LSM14BQ9BX40 385 aaKnown RBP16.88■□□□□ 0.29
ZNF541-205ENST00000595558 STK17AQ9UEE5 414 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
ZNF541-205ENST00000595558 A0A087X0T9 212 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 EIF3HO15372 352 aaKnown RBP eCLIP16.87■□□□□ 0.29
ZNF541-205ENST00000595558 FAM228BP0C875 321 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 LIG3P49916 1009 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 CCDC43Q96MW1 224 aaKnown RBP16.87■□□□□ 0.29
ZNF541-205ENST00000595558 HEXIM1O94992 359 aaKnown RBP16.87■□□□□ 0.29
ZNF541-205ENST00000595558 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 ZCWPW2Q504Y3 356 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 KRT12Q99456 494 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
ZNF541-205ENST00000595558 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
ZNF541-205ENST00000595558 ZNF233A6NK53 670 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 GOLGA8KD6RF30 607 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 E9PMD0 336 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 NPR1P16066 1061 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 EMBQ6PCB8 327 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 MYOCDQ8IZQ8 938 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 MICALL1Q8N3F8 863 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 ADAMTS1Q9UHI8 967 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 COL4A3BPQ9Y5P4 624 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 FAM169AQ9Y6X4 670 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 FAM170AA1A519 330 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 NOVP48745 357 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 NT5C2P49902 561 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 TMEM266Q2M3C6 531 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 CFAP221Q4G0U5 840 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 TMEM119Q4V9L6 283 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 SFMBT2Q5VUG0 894 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 FAM133AQ8N9E0 248 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 PIK3R5Q8WYR1 880 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 IQCDQ96DY2 449 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 PSTPIP2Q9H939 334 aa16.86■□□□□ 0.29
ZNF541-205ENST00000595558 SSU72P8A0A1W2PR75 194 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 MARCH6O60337 910 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 HSF2BPO75031 334 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 SNHG28P0DPA3 235 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
ZNF541-205ENST00000595558 NNTQ13423 1086 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 RAPGEF1Q13905 1077 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 QRICH1Q2TAL8 776 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 SLC9C1Q4G0N8 1177 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 NLGN1Q8N2Q7 840 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 CYP2W1Q8TAV3 490 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 CASKIN2Q8WXE0 1202 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 PPM1EQ8WY54 764 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 KAT2BQ92831 832 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 PANK4Q9NVE7 773 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 ACTN1P12814 892 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 TADA2BQ86TJ2 420 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 CERS3Q8IU89 383 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 RUFY1Q96T51 708 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 TSG101Q99816 390 aa16.85■□□□□ 0.29
ZNF541-205ENST00000595558 GDF3Q9NR23 364 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms