RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PRPF38AQ8NAV1 312 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 SCFD2Q8WU76 684 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 LRRC45Q96CN5 670 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 NUDT12Q9BQG2 462 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 TMBIM4Q9HC24 238 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 PITPNM2Q9BZ72 1349 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 A0A087X0T9 212 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 FTCDO95954 541 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 FAM228BP0C875 321 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 BTDP43251 543 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 USP11P51784 963 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
VRK3-209ENST00000594948 DRP2Q13474 957 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 SLF2Q8IX21 1173 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 TEX11Q8IYF3 940 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 IFT81Q8WYA0 676 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 KAT2BQ92831 832 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 KCTD10Q9H3F6 313 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 SWAP70Q9UH65 585 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 JAG2Q9Y219 1238 aa14.54□□□□□ -0.08
VRK3-209ENST00000594948 FRMD3A2A2Y4 597 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 CCDC188H7C350 402 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 RAD51CO43502 376 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 RPS6KA4O75676 772 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 KIF4AO95239 1232 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 PRKCIP41743 596 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 FNTAP49354 379 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 RAPGEF1Q13905 1077 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 PLCB4Q15147 1175 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 RPS6KA1Q15418 735 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 NAA35Q5VZE5 725 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 TMC4Q7Z404 712 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 SH2D3CQ8N5H7 860 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 OTUD6BQ8N6M0 293 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 ZNF473Q8WTR7 871 aaKnown RBP14.53□□□□□ -0.08
VRK3-209ENST00000594948 QSER1Q2KHR3 1735 aa14.53□□□□□ -0.08
VRK3-209ENST00000594948 PNMA6FA0A0J9YX94 578 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 GOLGA6L10A6NI86 522 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 FAM107AO95990 144 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 HNRNPH1P31943 449 aaKnown RBP14.52□□□□□ -0.08
VRK3-209ENST00000594948 BIRC3Q13489 604 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 GRAPQ13588 217 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 MTMR3Q13615 1198 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 FRMD5Q7Z6J6 570 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 GRAPLQ8TC17 118 aaPredicted RBP14.52□□□□□ -0.08
VRK3-209ENST00000594948 HAS1Q92839 578 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 UBA5Q9GZZ9 404 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 DDX25Q9UHL0 483 aaKnown RBP14.52□□□□□ -0.08
VRK3-209ENST00000594948 FBXL5Q9UKA1 691 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 INTUQ9ULD6 942 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 NENFQ9UMX5 172 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 SAMM50Q9Y512 469 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 GAKO14976 1311 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 SPATA31A5Q5VU36 1347 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 SPATA31A7Q8IWB4 1347 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 MYO3BQ8WXR4 1341 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
VRK3-209ENST00000594948 A0A0A6YYK5 440 aaPredicted RBP14.52□□□□□ -0.09
VRK3-209ENST00000594948 IGKV6D-41A0A0C4DH26 115 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 ZSCAN5CA6NGD5 496 aaPredicted RBP14.52□□□□□ -0.09
VRK3-209ENST00000594948 CETN3O15182 167 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 ATP1A2P50993 1020 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 MRPL12P52815 198 aaKnown RBP14.52□□□□□ -0.09
VRK3-209ENST00000594948 GRIK5Q16478 980 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 ECM1Q16610 540 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 SKIDA1Q1XH10 827 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 AGBL2Q5U5Z8 902 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 KCTD16Q68DU8 428 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 RUFY4Q6ZNE9 571 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 NLRP14Q86W24 1093 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 COA7Q96BR5 231 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.52□□□□□ -0.09
VRK3-209ENST00000594948 SLITRK6Q9H5Y7 841 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 PLAAQ9Y263 795 aa14.52□□□□□ -0.09
VRK3-209ENST00000594948 ESYT3A0FGR9 886 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 ZBTB48P10074 688 aaPredicted RBP14.51□□□□□ -0.09
VRK3-209ENST00000594948 EPS15P42566 896 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 TNNI2P48788 182 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 GUCY2FP51841 1108 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 NPEPPSP55786 919 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 RHBDL3P58872 404 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 SPDYCQ5MJ68 293 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 TTC19Q6DKK2 380 aaPredicted RBP14.51□□□□□ -0.09
VRK3-209ENST00000594948 DPY19L2P1Q6NXN4 242 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 IRF2BP2Q7Z5L9 587 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 RASGEF1CQ8N431 466 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 LRRC57Q8N9N7 239 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 MYCBPAPQ8TBZ2 947 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 SCFD1Q8WVM8 642 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 LMBR1Q8WVP7 490 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 CUL5Q93034 780 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 A1CFQ9NQ94 594 aaKnown RBP14.51□□□□□ -0.09
VRK3-209ENST00000594948 EMILIN3Q9NT22 766 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 MTMR4Q9NYA4 1195 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms