RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC9A2Q9UBY0 812 aa20.21■□□□□ 0.83
SHKBP1-204ENST00000594862 SLC4A7Q9Y6M7 1214 aa20.21■□□□□ 0.83
SHKBP1-204ENST00000594862 VCANP13611 3396 aa20.21■□□□□ 0.83
SHKBP1-204ENST00000594862 BAIAP3O94812 1187 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 CKBP12277 381 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 GALNT17Q6IS24 598 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 OTOP2Q7RTS6 562 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 ATP6V0A1Q93050 837 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 SLKQ9H2G2 1235 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 BCAS3Q9H6U6 928 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 PKD2L1Q9P0L9 805 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 TCEAL9Q9UHQ7 104 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 NRCAMQ92823 1304 aa20.2■□□□□ 0.82
SHKBP1-204ENST00000594862 RPLP2P05387 115 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 DNAJB2P25686 324 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 NLRP5P59047 1200 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 DEFB128Q7Z7B8 93 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 CRYGNQ8WXF5 182 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 DHX38Q92620 1227 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 GLG1Q92896 1179 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 FTOQ9C0B1 505 aaKnown RBP eCLIP20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 AZI2Q9H6S1 392 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 AGO4Q9HCK5 861 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 VPS54Q9P1Q0 977 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 MSRAQ9UJ68 235 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 PRUNE2Q8WUY3 3088 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 STK36Q9NRP7 1315 aa20.19■□□□□ 0.82
SHKBP1-204ENST00000594862 CDH23Q9H251 3354 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 ZBBXA8MT70 800 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 PFKFB2O60825 505 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 XBP1P17861 261 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 STK3Q13188 491 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 PLA2G4DQ86XP0 818 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 TRIM50Q86XT4 487 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 SLC9A7Q96T83 725 aa20.18■□□□□ 0.82
SHKBP1-204ENST00000594862 SCN5AQ14524 2016 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 GSTTP1A0A1W2PQM5 241 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 EFCAB14O75071 495 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 LGR5O75473 907 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 SLC26A2P50443 739 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 TRIM71Q2Q1W2 868 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 TAF2Q6P1X5 1199 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 DAGLBQ8NCG7 672 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 CYP2W1Q8TAV3 490 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 PHOSPHO2Q8TCD6 241 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 WASF1Q92558 559 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 TIFAQ96CG3 184 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 RNPEPQ9H4A4 650 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 TBC1D22BQ9NU19 505 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 CXXC1Q9P0U4 656 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 PCDHA4Q9UN74 947 aa20.17■□□□□ 0.82
SHKBP1-204ENST00000594862 TRIP12Q14669 1992 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 CXCL10P02778 98 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 ARP10275 920 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 CIITAP33076 1130 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 AK2P54819 239 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 ACTR2P61160 394 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 PPFIA1Q13136 1202 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 CNKSR3Q6P9H4 555 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 LMBR1Q8WVP7 490 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 TPCN1Q9ULQ1 816 aa20.16■□□□□ 0.82
SHKBP1-204ENST00000594862 IGLV3-22A0A075B6J6 115 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 FAM86B1E9PN63 330 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 IPO5O00410 1097 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 FAM86B2P0C5J1 330 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 ATP2A2P16615 1042 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 THPOP40225 353 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 KCNJ6P48051 423 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 USP11P51784 963 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 SCRN1Q12765 414 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 ITGB3BPQ13352 177 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 ZNF618Q5T7W0 954 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 FAM160B1Q5W0V3 765 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 PLPPR4Q7Z2D5 763 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 VWCEQ96DN2 955 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 GUCD1Q96NT3 240 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 ZNF577Q9BSK1 485 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 PBX4Q9BYU1 374 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 SETD4Q9NVD3 440 aa20.15■□□□□ 0.82
SHKBP1-204ENST00000594862 KAT6AQ92794 2004 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 RRN3P2A6NIE6 340 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 RSPH10B2B2RC85 870 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 TREHO43280 583 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 PPFIA3O75145 1194 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 RSPH10BP0C881 870 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 ZNF200P98182 395 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 RSPH3Q86UC2 560 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 PCDHA11Q9Y5I1 949 aa20.14■□□□□ 0.81
SHKBP1-204ENST00000594862 ABHD14A-ACY1A0A1B0GW23 586 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 ATG7O95352 703 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 STAT5BP51692 787 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 NEK4P51957 841 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 ADAM17P78536 824 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 KRT76Q01546 638 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 HIC1Q14526 733 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 GRIK4Q16099 956 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms