RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ADORA2AP29274 412 aa16.98■□□□□ 0.31
VRK3-207ENST00000594092 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
VRK3-207ENST00000594092 CYP4F22Q6NT55 531 aa16.98■□□□□ 0.31
VRK3-207ENST00000594092 GPR142Q7Z601 462 aa16.98■□□□□ 0.31
VRK3-207ENST00000594092 MPHOSPH6Q99547 160 aaKnown RBP16.98■□□□□ 0.31
VRK3-207ENST00000594092 BPIFA3Q9BQP9 254 aa16.98■□□□□ 0.31
VRK3-207ENST00000594092 IVNS1ABPQ9Y6Y0 642 aa16.98■□□□□ 0.31
VRK3-207ENST00000594092 MYMKA6NI61 221 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 KLRC4O43908 158 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 COBLO75128 1261 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 CCNE2O96020 404 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 PLA2G4BP0C869 781 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 MAPK4P31152 587 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 TM4SF4P48230 202 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 PSMC6P62333 389 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 IQCB1Q15051 598 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 ZNF792Q3KQV3 632 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 SEPT14Q6ZU15 432 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
VRK3-207ENST00000594092 ZNF784Q8NCA9 323 aaPredicted RBP16.97■□□□□ 0.31
VRK3-207ENST00000594092 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 NFASCO94856 1347 aa16.97■□□□□ 0.31
VRK3-207ENST00000594092 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 TLR2O60603 784 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 MUTP22033 750 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 YY1P25490 414 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 KRT76Q01546 638 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 GRM1Q13255 1194 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
VRK3-207ENST00000594092 PLEKHH3Q7Z736 793 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 TPH2Q8IWU9 490 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 KCTD17Q8N5Z5 321 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 NEK9Q8TD19 979 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 MORC4Q8TE76 937 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 PDLIM2Q96JY6 352 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 BCAS3Q9H6U6 928 aa16.96■□□□□ 0.31
VRK3-207ENST00000594092 ASIC1P78348 528 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 PLCB2Q00722 1185 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 SP2Q02086 613 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 GRB14Q14449 540 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 ZNF746Q6NUN9 644 aaPredicted RBP16.96■□□□□ 0.3
VRK3-207ENST00000594092 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 C17orf99Q6UX52 265 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 MLKLQ8NB16 471 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 SENP7Q9BQF6 1050 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 ZFYVE28Q9HCC9 887 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 RMND1Q9NWS8 449 aa16.96■□□□□ 0.3
VRK3-207ENST00000594092 WRAP73Q9P2S5 460 aaPredicted RBP16.96■□□□□ 0.3
VRK3-207ENST00000594092 WDR64B1ANS9 1081 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
VRK3-207ENST00000594092 P4HBP07237 508 aaKnown RBP16.95■□□□□ 0.3
VRK3-207ENST00000594092 JAK3P52333 1124 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 SLC12A3P55017 1021 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 KCNB1Q14721 858 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 KMT5BQ4FZB7 885 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
VRK3-207ENST00000594092 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 LXNQ9BS40 222 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 TCEAL9Q9UHQ7 104 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 DACH1Q9UI36 760 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 SAMM50Q9Y512 469 aa16.95■□□□□ 0.3
VRK3-207ENST00000594092 ASB14A6NK59 587 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 SFNP31947 248 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 CRHR2Q13324 411 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 EEPD1Q7L9B9 569 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 AOPEPQ8N6M6 819 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 SYT2Q8N9I0 419 aaPredicted RBP16.94■□□□□ 0.3
VRK3-207ENST00000594092 RDM1Q8NG50 284 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 DDX12PQ92771 950 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 JPH1Q9HDC5 661 aaPredicted RBP16.94■□□□□ 0.3
VRK3-207ENST00000594092 SLC9A2Q9UBY0 812 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 PLXNA1Q9UIW2 1896 aa16.94■□□□□ 0.3
VRK3-207ENST00000594092 RHOBTB3O94955 611 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 ADCY5O95622 1261 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 EYA4O95677 639 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 CYP11B2P19099 503 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 DYMQ7RTS9 669 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 GPBP1Q86WP2 473 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 PIGOQ8TEQ8 1089 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 TRIM44Q96DX7 344 aaPredicted RBP16.93■□□□□ 0.3
VRK3-207ENST00000594092 BHMT2Q9H2M3 363 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 DOCK5Q9H7D0 1870 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 MCM3APO60318 1980 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 SLC15A5A6NIM6 579 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 RASSF10A6NK89 507 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 SMTNL1A8MU46 457 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 ZBTB39O15060 712 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 TGFB3P10600 412 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 UBA1P22314 1058 aaKnown RBP16.93■□□□□ 0.3
VRK3-207ENST00000594092 TPM4P67936 248 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 NOGQ13253 232 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 DEFB115Q30KQ5 88 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
VRK3-207ENST00000594092 UNC13DQ70J99 1090 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 ZNF467Q7Z7K2 595 aaPredicted RBP16.93■□□□□ 0.3
VRK3-207ENST00000594092 SMAP1Q8IYB5 467 aaPredicted RBP16.93■□□□□ 0.3
VRK3-207ENST00000594092 SMYD4Q8IYR2 804 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms