RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 KCNA5P22460 613 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 KIF5BP33176 963 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 TCF7P36402 384 aaPredicted RBP18.83■□□□□ 0.6
LIG1-205ENST00000593425 PLA2G5P39877 138 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 LEXMQ3ZCV2 418 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 XRRA1Q6P2D8 792 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 RUFY4Q6ZNE9 571 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 NLRX1Q86UT6 975 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 SRBD1Q8N5C6 995 aaKnown RBP18.83■□□□□ 0.6
LIG1-205ENST00000593425 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 C11orf16Q9NQ32 467 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.6
LIG1-205ENST00000593425 H3BNC9 293 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 SH2B2O14492 632 aaPredicted RBP18.82■□□□□ 0.6
LIG1-205ENST00000593425 PRC1O43663 620 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 CHRNA1P02708 482 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 IL9P15248 144 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 KCNA2P16389 499 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 SMARCA1P28370 1054 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 GPM6BQ13491 265 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 CASC1Q6TDU7 716 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 APBB2Q92870 758 aa18.82■□□□□ 0.6
LIG1-205ENST00000593425 IFIH1Q9BYX4 1025 aaKnown RBP18.82■□□□□ 0.6
LIG1-205ENST00000593425 NRCAMQ92823 1304 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 ITGB5P18084 799 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 UBE2SQ16763 222 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 RAB11FIP4Q86YS3 637 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 TMEM192Q8IY95 271 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 GPRASP2Q96D09 838 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 LZTS2Q9BRK4 669 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
LIG1-205ENST00000593425 GSTTP1A0A1W2PQM5 241 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 hCG_1642624A0A1W2PR95 340 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 FAM86C2PA6NEL3 165 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 GHRP10912 638 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 MARK3P27448 753 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
LIG1-205ENST00000593425 MGAT3Q09327 533 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 PTPROQ16827 1216 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 TIGD5Q53EQ6 642 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 TMEM31Q5JXX7 168 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 FAM178BQ8IXR5 827 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 GIMAP8Q8ND71 665 aaPredicted RBP18.8■□□□□ 0.6
LIG1-205ENST00000593425 BANK1Q8NDB2 785 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 FAM122AQ96E09 287 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 EHMT1Q9H9B1 1298 aa18.8■□□□□ 0.6
LIG1-205ENST00000593425 CCDC69A6NI79 296 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 H3BQ06 376 aaPredicted RBP18.79■□□□□ 0.6
LIG1-205ENST00000593425 LINC00271P0C7V0 271 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 GNAQP50148 359 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 PPFIA1Q13136 1202 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 TCEAL5Q5H9L2 206 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 PTCRAQ6ISU1 281 aaPredicted RBP18.79■□□□□ 0.6
LIG1-205ENST00000593425 RPAINQ86UA6 219 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 NEK9Q8TD19 979 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 TMEM87BQ96K49 555 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 LSG1Q9H089 658 aaKnown RBP18.79■□□□□ 0.6
LIG1-205ENST00000593425 PSTPIP2Q9H939 334 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 UBIAD1Q9Y5Z9 338 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 KIAA1671Q9BY89 1806 aa18.79■□□□□ 0.6
LIG1-205ENST00000593425 PI4K2BG5E9Z4 385 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 MCM5P33992 734 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 LPIN1Q14693 890 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 GRIK4Q16099 956 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 MARCH8Q5T0T0 291 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 TAF2Q6P1X5 1199 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 SEPT1Q8WYJ6 367 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 ZBTB10Q96DT7 871 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 IL17RAQ96F46 866 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 RC3H2Q9HBD1 1191 aaKnown RBP18.78■□□□□ 0.6
LIG1-205ENST00000593425 TUBE1Q9UJT0 475 aa18.78■□□□□ 0.6
LIG1-205ENST00000593425 LOXHD1Q8IVV2 1947 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 GRXCR2A6NFK2 248 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 SLC27A2O14975 620 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 GPR37L1O60883 481 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 LIFRP42702 1097 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 MTMR1Q13613 665 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 GJD3Q8N144 294 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 TMTC2Q8N394 836 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 FIBCD1Q8N539 461 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 DNAJB3Q8WWF6 145 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 PABPC5Q96DU9 382 aaKnown RBP18.77■□□□□ 0.6
LIG1-205ENST00000593425 CDHR1Q96JP9 859 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 NSUN3Q9H649 340 aaKnown RBP18.77■□□□□ 0.6
LIG1-205ENST00000593425 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 PCDHA6Q9UN73 950 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 PCDHA8Q9Y5H6 950 aa18.77■□□□□ 0.6
LIG1-205ENST00000593425 ADGRA3Q8IWK6 1321 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 MBLAC1A4D2B0 266 aaPredicted RBP18.76■□□□□ 0.59
LIG1-205ENST00000593425 SPDYE3A6NKU9 549 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 CTNNB1P35222 781 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 IGBP1P78318 339 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 COL19A1Q14993 1142 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 TMTC3Q6ZXV5 915 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 LINC01599Q8WXQ3 324 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms