RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 GLT8D2Q9H1C3 349 aa26.65■■□□□ 1.86
MBD3-211ENST00000592965 SETD4Q9NVD3 440 aa26.65■■□□□ 1.86
MBD3-211ENST00000592965 BARHL2Q9NY43 387 aa26.65■■□□□ 1.86
MBD3-211ENST00000592965 SNX14Q9Y5W7 946 aa26.65■■□□□ 1.86
MBD3-211ENST00000592965 NID2Q14112 1375 aa26.65■■□□□ 1.86
MBD3-211ENST00000592965 TLL1O43897 1013 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 ADAM17P78536 824 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 DEFB103AP81534 67 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 IKBKEQ14164 716 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 FBXL16Q8N461 479 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 LMBR1Q8WVP7 490 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 SEPT1Q8WYJ6 367 aa26.64■■□□□ 1.86
MBD3-211ENST00000592965 NCOR1O75376 2440 aa26.64■■□□□ 1.85
MBD3-211ENST00000592965 CCDC196A0A1B0GTZ2 297 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 GSTTP1A0A1W2PQM5 241 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 ARHGEF15O94989 841 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 REC8O95072 547 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 CPA1P15085 419 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 METAP2P50579 478 aaKnown RBP eCLIP26.63■■□□□ 1.859e-7■■□□□ 13.7
MBD3-211ENST00000592965 BLOC1S2Q6QNY1 142 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 ANO3Q9BYT9 981 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 NRCAMQ92823 1304 aa26.63■■□□□ 1.85
MBD3-211ENST00000592965 AP3B2Q13367 1082 aa26.62■■□□□ 1.85
MBD3-211ENST00000592965 MKRN4PQ13434 485 aaPredicted RBP26.62■■□□□ 1.85
MBD3-211ENST00000592965 Q6ZUG5 572 aa26.62■■□□□ 1.85
MBD3-211ENST00000592965 MXRA8Q9BRK3 442 aa26.62■■□□□ 1.85
MBD3-211ENST00000592965 PKD2L1Q9P0L9 805 aa26.62■■□□□ 1.85
MBD3-211ENST00000592965 NAP1L2Q9ULW6 460 aaPredicted RBP26.62■■□□□ 1.85
MBD3-211ENST00000592965 SMCO2A6NFE2 343 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 GJB5O95377 273 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 ADD1P35611 737 aaKnown RBP26.61■■□□□ 1.85
MBD3-211ENST00000592965 ARHGAP4P98171 946 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 APOBRQ0VD83 1088 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 PFKFB3Q16875 520 aaPredicted RBP26.61■■□□□ 1.85
MBD3-211ENST00000592965 PLEKHG4Q58EX7 1191 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 PPM1EQ8WY54 764 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 BRF1Q92994 677 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 AGXT2Q9BYV1 514 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 JPH1Q9HDC5 661 aaPredicted RBP26.61■■□□□ 1.85
MBD3-211ENST00000592965 KCNH7Q9NS40 1196 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 ERAP1Q9NZ08 941 aa26.61■■□□□ 1.85
MBD3-211ENST00000592965 COL4A4P53420 1690 aaPredicted RBP26.6■■□□□ 1.85
MBD3-211ENST00000592965 POU3F3P20264 500 aaPredicted RBP26.6■■□□□ 1.85
MBD3-211ENST00000592965 RPS6KB1P23443 525 aa26.6■■□□□ 1.85
MBD3-211ENST00000592965 SREBF1P36956 1147 aa26.6■■□□□ 1.85
MBD3-211ENST00000592965 CLK2P49760 499 aaKnown RBP26.6■■□□□ 1.85
MBD3-211ENST00000592965 CEP55Q53EZ4 464 aa26.6■■□□□ 1.85
MBD3-211ENST00000592965 TMCO2Q7Z6W1 182 aaPredicted RBP26.6■■□□□ 1.85
MBD3-211ENST00000592965 DBF4BQ8NFT6 615 aa26.6■■□□□ 1.85
MBD3-211ENST00000592965 ZBED2Q9BTP6 218 aa26.6■■□□□ 1.85
MBD3-211ENST00000592965 EPOPA6NHQ4 379 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 CTSHP09668 335 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 SCG2P13521 617 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 PPFIA1Q13136 1202 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 RPAINQ86UA6 219 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 CYP2W1Q8TAV3 490 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 PGBD1Q96JS3 809 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 RAD9AQ99638 391 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 SMARCAD1Q9H4L7 1026 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 CERS4Q9HA82 394 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 PRDM6Q9NQX0 595 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 SIP14410 1827 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 NFASCO94856 1347 aa26.59■■□□□ 1.85
MBD3-211ENST00000592965 ESYT2A0FGR8 921 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 LCHNA4D1U4 455 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 EPB41L2O43491 1005 aaKnown RBP26.58■■□□□ 1.85
MBD3-211ENST00000592965 CCDC85BQ15834 202 aaPredicted RBP26.58■■□□□ 1.85
MBD3-211ENST00000592965 FAM26DQ5JW98 314 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 TAF2Q6P1X5 1199 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 ARNTL2Q8WYA1 636 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 SEPT8Q92599 483 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 GLG1Q92896 1179 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 THEGQ9P2T0 379 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 SLC9A2Q9UBY0 812 aa26.58■■□□□ 1.85
MBD3-211ENST00000592965 MEIS1O00470 390 aa26.57■■□□□ 1.84
MBD3-211ENST00000592965 MARK3P27448 753 aa26.57■■□□□ 1.84
MBD3-211ENST00000592965 PSMA5P28066 241 aa26.57■■□□□ 1.84
MBD3-211ENST00000592965 TJAP1Q5JTD0 557 aa26.57■■□□□ 1.84
MBD3-211ENST00000592965 SYMPKQ92797 1274 aaKnown RBP26.57■■□□□ 1.84
MBD3-211ENST00000592965 SDF4Q9BRK5 362 aa26.57■■□□□ 1.84
MBD3-211ENST00000592965 TMEM260Q9NX78 707 aa26.57■■□□□ 1.84
MBD3-211ENST00000592965 MBLAC1A4D2B0 266 aaPredicted RBP26.56■■□□□ 1.84
MBD3-211ENST00000592965 RFXAPO00287 272 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 GTPBP6O43824 516 aaPredicted RBP26.56■■□□□ 1.84
MBD3-211ENST00000592965 AMHP03971 560 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 GRIK4Q16099 956 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.56■■□□□ 1.844e-7■■■■□ 25.5
MBD3-211ENST00000592965 NIPA1Q7RTP0 329 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 ATXN2LQ8WWM7 1075 aaKnown RBP26.56■■□□□ 1.84
MBD3-211ENST00000592965 PCYT2Q99447 389 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 AGO4Q9HCK5 861 aaKnown RBP26.56■■□□□ 1.84
MBD3-211ENST00000592965 TUBE1Q9UJT0 475 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 MTCH2Q9Y6C9 303 aa26.56■■□□□ 1.84
MBD3-211ENST00000592965 RBAK-RBAKDNI3L0D1 243 aa26.55■■□□□ 1.84
MBD3-211ENST00000592965 PRPF3O43395 683 aaKnown RBP26.55■■□□□ 1.84
MBD3-211ENST00000592965 ARP10275 920 aa26.55■■□□□ 1.84
MBD3-211ENST00000592965 ITGB3BPQ13352 177 aaPredicted RBP26.55■■□□□ 1.84
MBD3-211ENST00000592965 RUFY4Q6ZNE9 571 aa26.55■■□□□ 1.84
MBD3-211ENST00000592965 CCDC12Q8WUD4 166 aaPredicted RBP26.55■■□□□ 1.84
MBD3-211ENST00000592965 OSBPL7Q9BZF2 842 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms