RNA–Protein interactions for RNA: ENST00000592590.6

TMEM259-209, Transcript of transmembrane protein 259, human

TSL 5 BASIC

Gene TMEM259, Length 2,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-209	ENST00000592590	CARS	P49589	748 aa	Known RBP	21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	NFIA	Q12857	509 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	ADAM9	Q13443	819 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	FAM153C	Q494X1	144 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	ARSH	Q5FYA8	562 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	GOLPH3	Q9H4A6	298 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	EMILIN3	Q9NT22	766 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	FAM153A	Q9UHL3	310 aa		21.33	■■□□□ 1.01
TMEM259-209	ENST00000592590	PSMC6	P62333	389 aa		21.33	■■□□□ 1
TMEM259-209	ENST00000592590	P2RX7	Q99572	595 aa	Known RBP	21.33	■■□□□ 1
TMEM259-209	ENST00000592590	ATF5	Q9Y2D1	282 aa	Predicted RBP	21.33	■■□□□ 1
TMEM259-209	ENST00000592590	DOK7	Q18PE1	504 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	KIAA0753	Q2KHM9	967 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	PPP1R18	Q6NYC8	613 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	CCDC65	Q8IXS2	484 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	IFT81	Q8WYA0	676 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	EDEM3	Q9BZQ6	932 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	NFU1	Q9UMS0	254 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	VGLL3	A8MV65	326 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	KRT18	P05783	430 aa	Known RBP	21.32	■■□□□ 1
TMEM259-209	ENST00000592590	CACNB3	P54284	484 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	CFAP221	Q4G0U5	840 aa		21.32	■■□□□ 1
TMEM259-209	ENST00000592590	RNF10	Q8N5U6	811 aa	Known RBP	21.32	■■□□□ 1
TMEM259-209	ENST00000592590	EPHB4	P54760	987 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	KLHL30	Q0D2K2	578 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	NAB2	Q15742	525 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	QRICH1	Q2TAL8	776 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	TTMP	Q5BVD1	217 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	NHS	Q6T4R5	1651 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	LTBP4	Q8N2S1	1624 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	PPFIA4	O75335	1185 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	BBOX1	O75936	387 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	SLC9A1	P19634	815 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	GUCY2D	Q02846	1103 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	KCNH2	Q12809	1159 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	SLC18A3	Q16572	532 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	HYI	Q5T013	277 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	CEP63	Q96MT8	703 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	NT5C3A	Q9H0P0	336 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	EPB41L5	Q9HCM4	733 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	PCDHA1	Q9Y5I3	950 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	PCDHAC2	Q9Y5I4	1007 aa		21.31	■■□□□ 1
TMEM259-209	ENST00000592590	IRAK1	P51617	712 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	SH2D3C	Q8N5H7	860 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	KRT12	Q99456	494 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	GAN	Q9H2C0	597 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	HEXIM1	O94992	359 aa	Known RBP	21.3	■■□□□ 1
TMEM259-209	ENST00000592590	NR2F2	P24468	414 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	DDR1	Q08345	913 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	PABPC4	Q13310	644 aa	Known RBP eCLIP	21.3	■■□□□ 1
TMEM259-209	ENST00000592590	SEPT2	Q15019	361 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	KCTD16	Q68DU8	428 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	CDC42EP5	Q6NZY7	148 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	ZIM3	Q96PE6	472 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	SH3GL2	Q99962	352 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	KCNMB3	Q9NPA1	279 aa		21.3	■■□□□ 1
TMEM259-209	ENST00000592590	SHOX2	O60902	331 aa	Predicted RBP	21.29	■■□□□ 1
TMEM259-209	ENST00000592590	KRT14	P02533	472 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	EPS15	P42566	896 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	GUCY2F	P51841	1108 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	SLC12A3	P55017	1021 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	PROCA1	Q8NCQ7	364 aa	Predicted RBP	21.29	■■□□□ 1
TMEM259-209	ENST00000592590	BBX	Q8WY36	941 aa	Predicted RBP	21.29	■■□□□ 1
TMEM259-209	ENST00000592590	SYN2	Q92777	582 aa	Predicted RBP	21.29	■■□□□ 1
TMEM259-209	ENST00000592590	ANO3	Q9BYT9	981 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	KDM3A	Q9Y4C1	1321 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	GRID2IP	A4D2P6	1211 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	GCFC2	P16383	781 aa	Known RBP	21.29	■■□□□ 1
TMEM259-209	ENST00000592590	PTK2	Q05397	1052 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	TCP10	Q12799	353 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	ASIC2	Q16515	512 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	PRR16	Q569H4	304 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	GPATCH4	Q5T3I0	446 aa	Known RBP	21.29	■■□□□ 1
TMEM259-209	ENST00000592590	EMB	Q6PCB8	327 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	CATSPER3	Q86XQ3	398 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	TSPYL1	Q9H0U9	437 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	DNAJC18	Q9H819	358 aa		21.29	■■□□□ 1
TMEM259-209	ENST00000592590	MYH7B	A7E2Y1	1941 aa		21.28	■■□□□ 1
TMEM259-209	ENST00000592590	MEI1	Q5TIA1	1274 aa		21.28	■■□□□ 1
TMEM259-209	ENST00000592590	FOXR2	Q6PJQ5	311 aa		21.28	■■□□□ 1
TMEM259-209	ENST00000592590	DHX36	Q9H2U1	1008 aa	Known RBP	21.28	■■□□□ 1
TMEM259-209	ENST00000592590	FAM170A	A1A519	330 aa		21.28	■■□□□ 1
TMEM259-209	ENST00000592590	HOXD13	P35453	343 aa		21.28	■■□□□ 1
TMEM259-209	ENST00000592590	NUCKS1	Q9H1E3	243 aa	Known RBP	21.28	■■□□□ 1
TMEM259-209	ENST00000592590	HDAC9	Q9UKV0	1011 aa		21.28	■■□□□ 1
TMEM259-209	ENST00000592590	GNA14	O95837	355 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	CCT5	P48643	541 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	MARS	P56192	900 aa	Known RBP	21.27	■■□□□ 1
TMEM259-209	ENST00000592590	ZNF571	Q7Z3V5	609 aa	Predicted RBP	21.27	■■□□□ 1
TMEM259-209	ENST00000592590	CAVIN3	Q969G5	261 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	CCDC43	Q96MW1	224 aa	Known RBP	21.27	■■□□□ 1
TMEM259-209	ENST00000592590	CAPS2	Q9BXY5	557 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	SWAP70	Q9UH65	585 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	PCDHGC5	Q9Y5F6	944 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	RSPH10B2	B2RC85	870 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	HSF2BP	O75031	334 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	RSPH10B	P0C881	870 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	MYB	P10242	640 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	GNGT1	P63211	74 aa		21.27	■■□□□ 1
TMEM259-209	ENST00000592590	CDC37	Q16543	378 aa	Predicted RBP	21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms