RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 NLRP5P59047 1200 aa31.03■■■□□ 2.56
SMAD4-213ENST00000591914 Q7L0L9 218 aa31.03■■■□□ 2.56
SMAD4-213ENST00000591914 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.02■■■□□ 2.56
SMAD4-213ENST00000591914 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.02■■■□□ 2.56
SMAD4-213ENST00000591914 C17orf102A2RUQ5 167 aa31.02■■■□□ 2.56
SMAD4-213ENST00000591914 ITGB3BPQ13352 177 aaPredicted RBP31.02■■■□□ 2.56
SMAD4-213ENST00000591914 TRIM71Q2Q1W2 868 aaKnown RBP31.02■■■□□ 2.56
SMAD4-213ENST00000591914 SERINC5Q86VE9 423 aa31.02■■■□□ 2.56
SMAD4-213ENST00000591914 SDF4Q9BRK5 362 aa31.02■■■□□ 2.56
SMAD4-213ENST00000591914 RNPEPQ9H4A4 650 aa31.02■■■□□ 2.56
SMAD4-213ENST00000591914 SLC9A2Q9UBY0 812 aa31.02■■■□□ 2.56
SMAD4-213ENST00000591914 CKBP12277 381 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 SELPP16109 830 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 NEK4P51957 841 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 OTOP2Q7RTS6 562 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 DEFB128Q7Z7B8 93 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 WNT8BQ93098 351 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 AIFM3Q96NN9 605 aa31.01■■■□□ 2.55
SMAD4-213ENST00000591914 MTIF3Q9H2K0 278 aaKnown RBP31.01■■■□□ 2.55
SMAD4-213ENST00000591914 CXXC1Q9P0U4 656 aaPredicted RBP31.01■■■□□ 2.55
SMAD4-213ENST00000591914 STK36Q9NRP7 1315 aa31■■■□□ 2.55
SMAD4-213ENST00000591914 LRRC8DQ7L1W4 858 aa31■■■□□ 2.55
SMAD4-213ENST00000591914 PLA2G4DQ86XP0 818 aa31■■■□□ 2.55
SMAD4-213ENST00000591914 PCDHA4Q9UN74 947 aa31■■■□□ 2.55
SMAD4-213ENST00000591914 EMSYQ7Z589 1322 aa30.99■■■□□ 2.55
SMAD4-213ENST00000591914 CIITAP33076 1130 aa30.99■■■□□ 2.55
SMAD4-213ENST00000591914 DAGLBQ8NCG7 672 aa30.99■■■□□ 2.55
SMAD4-213ENST00000591914 ATP6V0A1Q93050 837 aa30.99■■■□□ 2.55
SMAD4-213ENST00000591914 MTMR10Q9NXD2 777 aa30.99■■■□□ 2.55
SMAD4-213ENST00000591914 LGR5O75473 907 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 CTDNEP1O95476 244 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 ACTR2P61160 394 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 NPY5RQ15761 445 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 ME3Q16798 604 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 SMARCAD1Q9H4L7 1026 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 SETD4Q9NVD3 440 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 ERAP1Q9NZ08 941 aa30.98■■■□□ 2.55
SMAD4-213ENST00000591914 M0R2N6 131 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 TREHO43280 583 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 PARNO95453 639 aaKnown RBP30.97■■■□□ 2.55
SMAD4-213ENST00000591914 LARGE1O95461 756 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 GNAT1P11488 350 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 ADAM17P78536 824 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 SETQ01105 290 aaPredicted RBP30.97■■■□□ 2.55
SMAD4-213ENST00000591914 GPNMBQ14956 572 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 GALNT17Q6IS24 598 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 TRAF7Q6Q0C0 670 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 GLG1Q92896 1179 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 PCYT2Q99447 389 aa30.97■■■□□ 2.55
SMAD4-213ENST00000591914 IPO5O00410 1097 aaKnown RBP30.96■■■□□ 2.55
SMAD4-213ENST00000591914 DHX15O43143 795 aaKnown RBP30.96■■■□□ 2.55
SMAD4-213ENST00000591914 EDIL3O43854 480 aa30.96■■■□□ 2.55
SMAD4-213ENST00000591914 ZNF697Q5TEC3 545 aa30.96■■■□□ 2.55
SMAD4-213ENST00000591914 BLIDQ8IZY5 108 aa30.96■■■□□ 2.55
SMAD4-213ENST00000591914 LMBR1Q8WVP7 490 aa30.96■■■□□ 2.55
SMAD4-213ENST00000591914 GTF3C6Q969F1 213 aa30.96■■■□□ 2.55
SMAD4-213ENST00000591914 NRCAMQ92823 1304 aa30.96■■■□□ 2.55
SMAD4-213ENST00000591914 ATG7O95352 703 aa30.95■■■□□ 2.55
SMAD4-213ENST00000591914 ZNF618Q5T7W0 954 aa30.95■■■□□ 2.55
SMAD4-213ENST00000591914 NECAB1Q8N987 351 aa30.95■■■□□ 2.55
SMAD4-213ENST00000591914 LENG9Q96B70 501 aa30.95■■■□□ 2.55
SMAD4-213ENST00000591914 C22orf23Q9BZE7 217 aa30.95■■■□□ 2.55
SMAD4-213ENST00000591914 TET1Q8NFU7 2136 aa30.95■■■□□ 2.54
SMAD4-213ENST00000591914 GRXCR1A8MXD5 290 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 CCNE2O96020 404 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 ACTN1P12814 892 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 DNAJB2P25686 324 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 MARK3P27448 753 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 USP11P51784 963 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 PRR16Q569H4 304 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 ZNF577Q9BSK1 485 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 PHF20Q9BVI0 1012 aa30.94■■■□□ 2.54
SMAD4-213ENST00000591914 FTOQ9C0B1 505 aaKnown RBP eCLIP30.94■■■□□ 2.54
SMAD4-213ENST00000591914 TMEM265A0A087WTH1 108 aa30.93■■■□□ 2.54
SMAD4-213ENST00000591914 CXCL10P02778 98 aa30.93■■■□□ 2.54
SMAD4-213ENST00000591914 TBCKQ8TEA7 893 aa30.93■■■□□ 2.54
SMAD4-213ENST00000591914 AZI2Q9H6S1 392 aa30.93■■■□□ 2.54
SMAD4-213ENST00000591914 TBC1D22BQ9NU19 505 aa30.93■■■□□ 2.54
SMAD4-213ENST00000591914 SLC4A7Q9Y6M7 1214 aa30.93■■■□□ 2.54
SMAD4-213ENST00000591914 CDH23Q9H251 3354 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 IGKV6D-21A0A0A0MT36 114 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 NBNO60934 754 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 DTNBO60941 627 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 CAND2O75155 1236 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 THPOP40225 353 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 PPFIA1Q13136 1202 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 PLPPR4Q7Z2D5 763 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 PBX4Q9BYU1 374 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 TTYH1Q9H313 450 aaPredicted RBP30.92■■■□□ 2.54
SMAD4-213ENST00000591914 ORC3Q9UBD5 711 aaPredicted RBP30.92■■■□□ 2.54
SMAD4-213ENST00000591914 KCNJ14Q9UNX9 436 aa30.92■■■□□ 2.54
SMAD4-213ENST00000591914 KAT6AQ92794 2004 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 ZBBXA8MT70 800 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 DDX39AO00148 427 aaKnown RBP30.91■■■□□ 2.54
SMAD4-213ENST00000591914 XBP1P17861 261 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 MBTPS1Q14703 1052 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 ABHD15Q6UXT9 468 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 KIF2CQ99661 725 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 SEMA6BQ9H3T3 888 aa30.91■■■□□ 2.54
SMAD4-213ENST00000591914 FDPSP14324 419 aaKnown RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms