RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 RXRAP19793 462 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 DEFB103AP81534 67 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 MBTPS1Q14703 1052 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 USP17L6PQ6QN14 398 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 SRBD1Q8N5C6 995 aaKnown RBP20.57■□□□□ 0.88
VAT1-208ENST00000590924 ASB2Q96Q27 587 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 BCAS3Q9H6U6 928 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 EMSYQ7Z589 1322 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 EPOPA6NHQ4 379 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 GTPBP6O43824 516 aaPredicted RBP20.56■□□□□ 0.88
VAT1-208ENST00000590924 MRPS5P82675 430 aaKnown RBP20.56■□□□□ 0.88
VAT1-208ENST00000590924 TCTN1Q2MV58 587 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 ZSCAN31Q96LW9 406 aaPredicted RBP20.56■□□□□ 0.88
VAT1-208ENST00000590924 SENP7Q9BQF6 1050 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 TSPYL2Q9H2G4 693 aaPredicted RBP20.56■□□□□ 0.88
VAT1-208ENST00000590924 CERS4Q9HA82 394 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 LIMCH1Q9UPQ0 1083 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 MTCH2Q9Y6C9 303 aa20.56■□□□□ 0.88
VAT1-208ENST00000590924 C17orf102A2RUQ5 167 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 RFXAPO00287 272 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 PFKFB2O60825 505 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 SMIM10L2AP0DMW4 78 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 SMIM10L2BP0DMW5 78 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 CDC27P30260 824 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 ADD1P35611 737 aaKnown RBP20.55■□□□□ 0.88
VAT1-208ENST00000590924 MCM2P49736 904 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 IKBKEQ14164 716 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 CYFIP1Q7L576 1253 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 RAB11FIP4Q86YS3 637 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 MICALL1Q8N3F8 863 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 ATP6V0A1Q93050 837 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 GPR20Q99678 358 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 RALGAPA2Q2PPJ7 1873 aa20.55■□□□□ 0.88
VAT1-208ENST00000590924 LGR5O75473 907 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 GJB5O95377 273 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 THPOP40225 353 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 FUT2Q10981 343 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 NLRX1Q86UT6 975 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 ZBED2Q9BTP6 218 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 SLKQ9H2G2 1235 aaPredicted RBP20.54■□□□□ 0.88
VAT1-208ENST00000590924 RNPEPQ9H4A4 650 aa20.54■□□□□ 0.88
VAT1-208ENST00000590924 LCHNA4D1U4 455 aa20.53■□□□□ 0.88
VAT1-208ENST00000590924 RSPH10B2B2RC85 870 aa20.53■□□□□ 0.88
VAT1-208ENST00000590924 CAND2O75155 1236 aa20.53■□□□□ 0.88
VAT1-208ENST00000590924 RSPH10BP0C881 870 aa20.53■□□□□ 0.88
VAT1-208ENST00000590924 IFNAR1P17181 557 aa20.53■□□□□ 0.88
VAT1-208ENST00000590924 CPLX2Q6PUV4 134 aaKnown RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 TMCO2Q7Z6W1 182 aaPredicted RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 CMTR1Q8N1G2 835 aaKnown RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 GIMAP8Q8ND71 665 aaPredicted RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 PSTPIP2Q9H939 334 aa20.53■□□□□ 0.88
VAT1-208ENST00000590924 SH2B1Q9NRF2 756 aaPredicted RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 ZNF215Q9UL58 517 aaPredicted RBP20.53■□□□□ 0.88
VAT1-208ENST00000590924 TREHO43280 583 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 GNAT1P11488 350 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 CCT2P78371 535 aaKnown RBP20.52■□□□□ 0.88
VAT1-208ENST00000590924 MKRN4PQ13434 485 aaPredicted RBP20.52■□□□□ 0.88
VAT1-208ENST00000590924 NTRK3Q16288 839 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 ME3Q16798 604 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 SPRED2Q7Z698 418 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 TRIM50Q86XT4 487 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 GPRASP2Q96D09 838 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 CDHR1Q96JP9 859 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 RAD9AQ99638 391 aa20.52■□□□□ 0.88
VAT1-208ENST00000590924 WDR81Q562E7 1941 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 TNFRSF10AO00220 468 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 ADAM17P78536 824 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 GRB10Q13322 594 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 PLEKHG4Q58EX7 1191 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 DBF4BQ8NFT6 615 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 TELO2Q9Y4R8 837 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 XIRP2A4UGR9 3374 aa20.51■□□□□ 0.87
VAT1-208ENST00000590924 MYH9P35579 1960 aaKnown RBP20.5■□□□□ 0.87
VAT1-208ENST00000590924 CPLX1O14810 134 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 PRPF3O43395 683 aaKnown RBP20.5■□□□□ 0.87
VAT1-208ENST00000590924 LPXNO60711 386 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 CDKL5O76039 1030 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 SCRN1Q12765 414 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 STK3Q13188 491 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 CCDC82Q8N4S0 544 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 ADAMTS19Q8TE59 1207 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 RNF26Q9BY78 433 aaPredicted RBP20.5■□□□□ 0.87
VAT1-208ENST00000590924 NCOA5Q9HCD5 579 aaKnown RBP20.5■□□□□ 0.87
VAT1-208ENST00000590924 SETD4Q9NVD3 440 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 V9GY48 417 aaPredicted RBP20.5■□□□□ 0.87
VAT1-208ENST00000590924 CNTNAP5Q8WYK1 1306 aa20.5■□□□□ 0.87
VAT1-208ENST00000590924 ATG2AQ2TAZ0 1938 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 SPDYE3A6NKU9 549 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 KCNA2P16389 499 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 SP4Q02446 784 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
VAT1-208ENST00000590924 UBE2SQ16763 222 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 AAK1Q2M2I8 961 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 UTP14CQ5TAP6 766 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms