RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RNPC3Q96LT9 517 aaKnown RBP25.45■■□□□ 1.66
MBD3-208ENST00000590830 PCYT2Q99447 389 aa25.45■■□□□ 1.66
MBD3-208ENST00000590830 JPH1Q9HDC5 661 aaPredicted RBP25.45■■□□□ 1.66
MBD3-208ENST00000590830 SLC9A2Q9UBY0 812 aa25.45■■□□□ 1.66
MBD3-208ENST00000590830 PITPNM1O00562 1244 aa25.44■■□□□ 1.66
MBD3-208ENST00000590830 DHX15O43143 795 aaKnown RBP25.44■■□□□ 1.66
MBD3-208ENST00000590830 CIITAP33076 1130 aa25.44■■□□□ 1.66
MBD3-208ENST00000590830 TRIM71Q2Q1W2 868 aaKnown RBP25.44■■□□□ 1.66
MBD3-208ENST00000590830 RASIP1Q5U651 963 aa25.44■■□□□ 1.66
MBD3-208ENST00000590830 BLIDQ8IZY5 108 aa25.44■■□□□ 1.66
MBD3-208ENST00000590830 DAGLBQ8NCG7 672 aa25.44■■□□□ 1.66
MBD3-208ENST00000590830 ORC3Q9UBD5 711 aaPredicted RBP25.44■■□□□ 1.66
MBD3-208ENST00000590830 CCNE2O96020 404 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 RBM25P49756 843 aaKnown RBP25.43■■□□□ 1.66
MBD3-208ENST00000590830 PTK7Q13308 1070 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 BFSP2Q13515 415 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 GPNMBQ14956 572 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 FAM177A1Q8N128 213 aaPredicted RBP25.43■■□□□ 1.66
MBD3-208ENST00000590830 RETREG2Q8NC44 543 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 NSUN7Q8NE18 718 aaKnown RBP25.43■■□□□ 1.66
MBD3-208ENST00000590830 LENG9Q96B70 501 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 SDF4Q9BRK5 362 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 PHF20Q9BVI0 1012 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 SETD4Q9NVD3 440 aa25.43■■□□□ 1.66
MBD3-208ENST00000590830 C17orf102A2RUQ5 167 aa25.42■■□□□ 1.66
MBD3-208ENST00000590830 LGR5O75473 907 aa25.42■■□□□ 1.66
MBD3-208ENST00000590830 ACTR2P61160 394 aa25.42■■□□□ 1.66
MBD3-208ENST00000590830 RBL2Q08999 1139 aa25.42■■□□□ 1.66
MBD3-208ENST00000590830 PSRC1Q6PGN9 363 aaPredicted RBP25.42■■□□□ 1.66
MBD3-208ENST00000590830 TREHO43280 583 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 JAK2O60674 1132 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 ATG7O95352 703 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 FGBP02675 491 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 CKBP12277 381 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 USP11P51784 963 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 ADAM17P78536 824 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 PRR16Q569H4 304 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 FAM109BQ6ICB4 259 aaPredicted RBP25.41■■□□□ 1.66
MBD3-208ENST00000590830 GALNT17Q6IS24 598 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 GPR153Q6NV75 609 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 TRAF7Q6Q0C0 670 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 DEFB128Q7Z7B8 93 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 SERINC5Q86VE9 423 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 CAGE1Q8TC20 777 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 TBCKQ8TEA7 893 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 HERVK_113Q902F9 699 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 CXXC1Q9P0U4 656 aaPredicted RBP25.41■■□□□ 1.66
MBD3-208ENST00000590830 ZNF215Q9UL58 517 aaPredicted RBP25.41■■□□□ 1.66
MBD3-208ENST00000590830 LIMCH1Q9UPQ0 1083 aa25.41■■□□□ 1.66
MBD3-208ENST00000590830 DDX39AO00148 427 aaKnown RBP25.4■■□□□ 1.66
MBD3-208ENST00000590830 IPO5O00410 1097 aaKnown RBP25.4■■□□□ 1.66
MBD3-208ENST00000590830 OTOP2Q7RTS6 562 aa25.4■■□□□ 1.66
MBD3-208ENST00000590830 RPUSD2Q8IZ73 545 aaKnown RBP25.4■■□□□ 1.66
MBD3-208ENST00000590830 OXER1Q8TDS5 423 aa25.4■■□□□ 1.66
MBD3-208ENST00000590830 AFAP1L1Q8TED9 768 aa25.4■■□□□ 1.66
MBD3-208ENST00000590830 ATP6V0A1Q93050 837 aa25.4■■□□□ 1.66
MBD3-208ENST00000590830 SMARCAD1Q9H4L7 1026 aa25.4■■□□□ 1.66
MBD3-208ENST00000590830 SELPP16109 830 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 MARK3P27448 753 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 ABHD15Q6UXT9 468 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 Q7L0L9 218 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 GLG1Q92896 1179 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 ZNF577Q9BSK1 485 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 ERAP1Q9NZ08 941 aa25.39■■□□□ 1.66
MBD3-208ENST00000590830 EMSYQ7Z589 1322 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 IGKV6D-21A0A0A0MT36 114 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 RFC2P35250 354 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 SMAD3P84022 425 aaKnown RBP25.38■■□□□ 1.65
MBD3-208ENST00000590830 ZNF618Q5T7W0 954 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 LRRC8DQ7L1W4 858 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 CCDC155Q8N6L0 562 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 LMBR1Q8WVP7 490 aa25.38■■□□□ 1.65
MBD3-208ENST00000590830 CYP3A7-CYP3A51PA0A087WV96 503 aa25.37■■□□□ 1.65
MBD3-208ENST00000590830 GRXCR1A8MXD5 290 aa25.37■■□□□ 1.65
MBD3-208ENST00000590830 CYP3A7P24462 503 aa25.37■■□□□ 1.65
MBD3-208ENST00000590830 SETQ01105 290 aaPredicted RBP25.37■■□□□ 1.65
MBD3-208ENST00000590830 MSH4O15457 936 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 NBNO60934 754 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 TDP2O95551 362 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 MBTPS1Q14703 1052 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 MARCH8Q5T0T0 291 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 PLPPR4Q7Z2D5 763 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 WASF1Q92558 559 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 GJA10Q969M2 543 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 TBC1D22BQ9NU19 505 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 TRIP12Q14669 1992 aaPredicted RBP25.36■■□□□ 1.65
MBD3-208ENST00000590830 NRCAMQ92823 1304 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 SCN5AQ14524 2016 aa25.36■■□□□ 1.65
MBD3-208ENST00000590830 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.35■■□□□ 1.65
MBD3-208ENST00000590830 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.35■■□□□ 1.65
MBD3-208ENST00000590830 PFKMP08237 780 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 XBP1P17861 261 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 THPOP40225 353 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 STAT5BP51692 787 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 PLCB4Q15147 1175 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 NONOQ15233 471 aaKnown RBP eCLIP25.35■■□□□ 1.65
MBD3-208ENST00000590830 INF2Q27J81 1249 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 TCTN1Q2MV58 587 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 EARS2Q5JPH6 523 aaKnown RBP25.35■■□□□ 1.65
MBD3-208ENST00000590830 KRT25Q7Z3Z0 450 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms