RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 PKP1Q13835 747 aa23.84■■□□□ 1.41
CIRBP-229ENST00000590704 ZNF174Q15697 407 aa23.84■■□□□ 1.41
CIRBP-229ENST00000590704 SDF4Q9BRK5 362 aa23.84■■□□□ 1.41
CIRBP-229ENST00000590704 UNC45AQ9H3U1 944 aa23.84■■□□□ 1.41
CIRBP-229ENST00000590704 VAV3Q9UKW4 847 aa23.84■■□□□ 1.41
CIRBP-229ENST00000590704 WDR81Q562E7 1941 aa23.84■■□□□ 1.41
CIRBP-229ENST00000590704 H3BQV1 296 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 TBX3O15119 743 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 ATP2B1P20020 1258 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 ATP4AP20648 1035 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 RTP1P59025 263 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 TRIM60Q495X7 471 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 ANKRD33Q7Z3H0 272 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 FAM20AQ96MK3 541 aa23.83■■□□□ 1.41
CIRBP-229ENST00000590704 A0A0U1RQG5 324 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-229ENST00000590704 EML1O00423 815 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 CD4P01730 458 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 PDCP20941 246 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 TRAPPC10P48553 1259 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 PSEN2P49810 448 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 BRDTQ58F21 947 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-229ENST00000590704 MCTP1Q6DN14 999 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 ZNF746Q6NUN9 644 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-229ENST00000590704 FERMT3Q86UX7 667 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 RNPEPQ9H4A4 650 aa23.82■■□□□ 1.4
CIRBP-229ENST00000590704 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.82■■□□□ 1.4
CIRBP-229ENST00000590704 H3BRB1 525 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 NOP56O00567 594 aaKnown RBP23.81■■□□□ 1.4
CIRBP-229ENST00000590704 STX6O43752 255 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 HOXC8P31273 242 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 TLE2Q04725 743 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 TTC38Q5R3I4 469 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 LRCH2Q5VUJ6 765 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 CCDC60Q8IWA6 550 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-229ENST00000590704 FAM126BQ8IXS8 530 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 NAP1L4Q99733 375 aaKnown RBP23.81■■□□□ 1.4
CIRBP-229ENST00000590704 TUT1Q9H6E5 874 aaKnown RBP23.81■■□□□ 1.4
CIRBP-229ENST00000590704 TRIP12Q14669 1992 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-229ENST00000590704 SUPT20HL2P0C7V6 817 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 MCM7P33993 719 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 FAAP100Q0VG06 881 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 MFSD10Q14728 455 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 UTP14CQ5TAP6 766 aaKnown RBP23.81■■□□□ 1.4
CIRBP-229ENST00000590704 FAM173BQ6P4H8 233 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 SESTD1Q86VW0 696 aa23.81■■□□□ 1.4
CIRBP-229ENST00000590704 EMSYQ7Z589 1322 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 VPS37CA5D8V6 355 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-229ENST00000590704 ADAM17P78536 824 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 PPP2R5CQ13362 524 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 KIAA0753Q2KHM9 967 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 NFRKBQ6P4R8 1299 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 SH3RF1Q7Z6J0 888 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 TOX2Q96NM4 488 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 HDAC6Q9UBN7 1215 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 ZDHHC9Q9Y397 364 aa23.8■■□□□ 1.4
CIRBP-229ENST00000590704 B4GALT4O60513 344 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 NEMFO60524 1076 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 GAS7O60861 476 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 STBD1O95210 358 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 KRT76Q01546 638 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 IL17AQ16552 155 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 AFAP1L1Q8TED9 768 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 VTI1AQ96AJ9 217 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 HTATIP2Q9BUP3 242 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 TEKT3Q9BXF9 490 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 MAFBQ9Y5Q3 323 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-229ENST00000590704 CEP290O15078 2479 aa23.79■■□□□ 1.4
CIRBP-229ENST00000590704 ZNF862O60290 1169 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 ITGB8P26012 769 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 ZNF200P98182 395 aaPredicted RBP23.78■■□□□ 1.4
CIRBP-229ENST00000590704 UGCGQ16739 394 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 GDF6Q6KF10 455 aaPredicted RBP23.78■■□□□ 1.4
CIRBP-229ENST00000590704 SWSAP1Q6NVH7 229 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 TRPV6Q9H1D0 765 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 ATP11BQ9Y2G3 1177 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 PCDHA10Q9Y5I2 948 aa23.78■■□□□ 1.4
CIRBP-229ENST00000590704 TRIM43BA6NCK2 446 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 RBAK-RBAKDNI3L0D1 243 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 DDIT3P35638 169 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 ORC2Q13416 577 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-229ENST00000590704 GNL2Q13823 731 aaKnown RBP23.77■■□□□ 1.4
CIRBP-229ENST00000590704 CALCRLQ16602 461 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 RILPL1Q5EBL4 403 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 PLPPR4Q7Z2D5 763 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 TRIM43Q96BQ3 446 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-229ENST00000590704 DISC1Q9NRI5 854 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 TRMT13Q9NUP7 481 aaKnown RBP23.77■■□□□ 1.4
CIRBP-229ENST00000590704 GTF2IRD1Q9UHL9 959 aa23.77■■□□□ 1.4
CIRBP-229ENST00000590704 STAT5BP51692 787 aa23.76■■□□□ 1.39
CIRBP-229ENST00000590704 PTGDRQ13258 359 aa23.76■■□□□ 1.39
CIRBP-229ENST00000590704 BRAPQ7Z569 592 aa23.76■■□□□ 1.39
CIRBP-229ENST00000590704 SMAP1Q8IYB5 467 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-229ENST00000590704 SMARCAD1Q9H4L7 1026 aa23.76■■□□□ 1.39
CIRBP-229ENST00000590704 PDLIM7Q9NR12 457 aa23.76■■□□□ 1.39
CIRBP-229ENST00000590704 WRAP73Q9P2S5 460 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-229ENST00000590704 PQBP1O60828 265 aaKnown RBP23.75■■□□□ 1.39
CIRBP-229ENST00000590704 PLCB4Q15147 1175 aa23.75■■□□□ 1.39
CIRBP-229ENST00000590704 SLFN12Q8IYM2 578 aa23.75■■□□□ 1.39
CIRBP-229ENST00000590704 DPF3Q92784 378 aa23.75■■□□□ 1.39
CIRBP-229ENST00000590704 FTOQ9C0B1 505 aaKnown RBP eCLIP23.75■■□□□ 1.398e-7■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms