RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 NEK9Q8TD19 979 aa19.52■□□□□ 0.72
CXXC1-212ENST00000589940 GSDMAQ96QA5 445 aa19.52■□□□□ 0.72
CXXC1-212ENST00000589940 RGL1Q9NZL6 768 aa19.52■□□□□ 0.72
CXXC1-212ENST00000589940 SLC15A5A6NIM6 579 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 SLITRK3O94933 977 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 MUTP22033 750 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 MCM6Q14566 821 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 ZNF467Q7Z7K2 595 aaPredicted RBP19.52■□□□□ 0.71
CXXC1-212ENST00000589940 REM2Q8IYK8 340 aaPredicted RBP19.52■□□□□ 0.71
CXXC1-212ENST00000589940 TRIML1Q8N9V2 468 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 DYDC2Q96IM9 177 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 SENP7Q9BQF6 1050 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 DNAJC25Q9H1X3 360 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 GRPEL1Q9HAV7 217 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 MAN1B1Q9UKM7 699 aa19.52■□□□□ 0.71
CXXC1-212ENST00000589940 KIAA1217Q5T5P2 1943 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 AOC2O75106 756 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 JAK3P52333 1124 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 ZNF746Q6NUN9 644 aaPredicted RBP19.51■□□□□ 0.71
CXXC1-212ENST00000589940 DPP9Q86TI2 863 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 RNF214Q8ND24 703 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 WDR64B1ANS9 1081 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 E9PMD0 336 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 CCNE2O96020 404 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 SFNP31947 248 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
CXXC1-212ENST00000589940 DPCR1Q3MIW9 517 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 RDM1Q8NG50 284 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 C7orf25Q9BPX7 421 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 TRIM9Q9C026 710 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 LRRC27Q9C0I9 530 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 JPH1Q9HDC5 661 aaPredicted RBP19.51■□□□□ 0.71
CXXC1-212ENST00000589940 DNM3Q9UQ16 869 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 DIS3Q9Y2L1 958 aaKnown RBP19.51■□□□□ 0.71
CXXC1-212ENST00000589940 SAMM50Q9Y512 469 aa19.51■□□□□ 0.71
CXXC1-212ENST00000589940 ZNF236Q9UL36 1845 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 TGFB3P10600 412 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 MRE11P49959 708 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 MORC3Q14149 939 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
CXXC1-212ENST00000589940 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 EEPD1Q7L9B9 569 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 TPH2Q8IWU9 490 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 FAM200AQ8TCP9 573 aa19.5■□□□□ 0.71
CXXC1-212ENST00000589940 PLA2G4BP0C869 781 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 SP2Q02086 613 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 C11orf57Q6ZUT1 292 aaPredicted RBP19.49■□□□□ 0.71
CXXC1-212ENST00000589940 ARMCX2Q7L311 632 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 LXNQ9BS40 222 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 RPN1P04843 607 aaKnown RBP19.49■□□□□ 0.71
CXXC1-212ENST00000589940 P4HBP07237 508 aaKnown RBP19.49■□□□□ 0.71
CXXC1-212ENST00000589940 PSMC6P62333 389 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 MORN1Q5T089 497 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 KCNV1Q6PIU1 500 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 SMAP1Q8IYB5 467 aaPredicted RBP19.49■□□□□ 0.71
CXXC1-212ENST00000589940 GIMAP8Q8ND71 665 aaPredicted RBP19.49■□□□□ 0.71
CXXC1-212ENST00000589940 RMND1Q9NWS8 449 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 SLC5A4Q9NY91 659 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 SLC9A2Q9UBY0 812 aa19.49■□□□□ 0.71
CXXC1-212ENST00000589940 BMP6P22004 513 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 UBA1P22314 1058 aaKnown RBP19.48■□□□□ 0.71
CXXC1-212ENST00000589940 ZNF165P49910 485 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 L1TD1Q5T7N2 865 aaKnown RBP19.48■□□□□ 0.71
CXXC1-212ENST00000589940 NAT10Q9H0A0 1025 aaKnown RBP19.48■□□□□ 0.71
CXXC1-212ENST00000589940 BCAS3Q9H6U6 928 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 PLXNA1Q9UIW2 1896 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 MYMKA6NI61 221 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 CNNM4Q6P4Q7 775 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 MAMDC4Q6UXC1 1216 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 FBXO16Q8IX29 292 aaPredicted RBP19.48■□□□□ 0.71
CXXC1-212ENST00000589940 BANK1Q8NDB2 785 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 MAML3Q96JK9 1138 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 ZSWIM4Q9H7M6 989 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 PCDHA10Q9Y5I2 948 aa19.48■□□□□ 0.71
CXXC1-212ENST00000589940 EYA4O95677 639 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 SSBP05455 408 aaKnown RBP eCLIP19.47■□□□□ 0.71
CXXC1-212ENST00000589940 SLC12A3P55017 1021 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 ASIC1P78348 528 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 NEDD9Q14511 834 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 CYFIP1Q7L576 1253 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 NACC1Q96RE7 527 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 WRAP73Q9P2S5 460 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-212ENST00000589940 KLRC4O43908 158 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 QARSP47897 775 aaKnown RBP19.47■□□□□ 0.71
CXXC1-212ENST00000589940 MAP2K5Q13163 448 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 KCNB1Q14721 858 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 SYT2Q8N9I0 419 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-212ENST00000589940 CBX8Q9HC52 389 aa19.47■□□□□ 0.71
CXXC1-212ENST00000589940 ACTR2P61160 394 aa19.46■□□□□ 0.71
CXXC1-212ENST00000589940 MLKLQ8NB16 471 aa19.46■□□□□ 0.71
CXXC1-212ENST00000589940 DDX12PQ92771 950 aa19.46■□□□□ 0.71
CXXC1-212ENST00000589940 VTA1Q9NP79 307 aa19.46■□□□□ 0.71
CXXC1-212ENST00000589940 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-212ENST00000589940 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
CXXC1-212ENST00000589940 MCM3APO60318 1980 aa19.45■□□□□ 0.7
CXXC1-212ENST00000589940 LYPLA2O95372 231 aa19.45■□□□□ 0.7
CXXC1-212ENST00000589940 GPBP1Q86WP2 473 aa19.45■□□□□ 0.7
CXXC1-212ENST00000589940 MSL3Q8N5Y2 521 aaKnown RBP19.45■□□□□ 0.7
CXXC1-212ENST00000589940 PIGOQ8TEQ8 1089 aa19.45■□□□□ 0.7
CXXC1-212ENST00000589940 BPIFA3Q9BQP9 254 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 283.7 ms