RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 SMC2O95347 1197 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 SLC25A27O95847 323 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 COL6A1P12109 1028 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 EIF2AK2P19525 551 aaKnown RBP11.43□□□□□ -0.58
APOC1-205ENST00000589781 CCDC173Q0VFZ6 552 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 CUL4BQ13620 913 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 MORC3Q14149 939 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 TMEM119Q4V9L6 283 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 NCAPH2Q6IBW4 605 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 RNF207Q6ZRF8 634 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 DHX40Q8IX18 779 aaKnown RBP11.43□□□□□ -0.58
APOC1-205ENST00000589781 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
APOC1-205ENST00000589781 CALML4Q96GE6 196 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 CCDC34Q96HJ3 373 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 PAWRQ96IZ0 340 aaKnown RBP11.43□□□□□ -0.58
APOC1-205ENST00000589781 PURBQ96QR8 312 aaKnown RBP11.43□□□□□ -0.58
APOC1-205ENST00000589781 TAAR1Q96RJ0 339 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 MMP19Q99542 508 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 RAB34Q9BZG1 259 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 PDE4DIPQ5VU43 2346 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 PFASO15067 1338 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 TBX3O15119 743 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
APOC1-205ENST00000589781 TFRCP02786 760 aaKnown RBP11.42□□□□□ -0.58
APOC1-205ENST00000589781 FCER1AP12319 257 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 BMP6P22004 513 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
APOC1-205ENST00000589781 SARSP49591 514 aaKnown RBP11.42□□□□□ -0.58
APOC1-205ENST00000589781 RPS6P62753 249 aaKnown RBP11.42□□□□□ -0.58
APOC1-205ENST00000589781 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 SPIRE1Q08AE8 756 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 NT5DC1Q5TFE4 455 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 KCNK18Q7Z418 384 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 DPP9Q86TI2 863 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 TRMT44Q8IYL2 757 aaKnown RBP11.42□□□□□ -0.58
APOC1-205ENST00000589781 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 CDK5RAP3Q96JB5 506 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 BLOC1S4Q9NUP1 217 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 VAV3Q9UKW4 847 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
APOC1-205ENST00000589781 KDM3AQ9Y4C1 1321 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 SOWAHBA6NEL2 793 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 ADCY6O43306 1168 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 CAVIN2O95810 425 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 ZNF865P0CJ78 1059 aaPredicted RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 SETQ01105 290 aaPredicted RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 CNTN2Q02246 1040 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 BAATQ14032 418 aaPredicted RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 DHX8Q14562 1220 aaKnown RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 MCM6Q14566 821 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 PGM5Q15124 567 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 ECM1Q16610 540 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 KRT79Q5XKE5 535 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 SAMD3Q8N6K7 520 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 TRIML1Q8N9V2 468 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 SPATA20Q8TB22 786 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 RAD54LQ92698 747 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 MXRA8Q9BRK3 442 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 KATNBL1Q9H079 304 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 NAT10Q9H0A0 1025 aaKnown RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 CUEDC2Q9H467 287 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 MAGEF1Q9HAY2 307 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
APOC1-205ENST00000589781 PXMP2Q9NR77 195 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 PKD2L1Q9P0L9 805 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 STK17AQ9UEE5 414 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 PCDHA12Q9UN75 941 aa11.41□□□□□ -0.58
APOC1-205ENST00000589781 BECN2A8MW95 431 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 H0YGN5 161 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 GOLGA6L19H0YKK7 550 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 CHMP2AO43633 222 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 MED24O75448 989 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 RPN1P04843 607 aaKnown RBP11.4□□□□□ -0.58
APOC1-205ENST00000589781 ARP10275 920 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 MYCLP12524 364 aaPredicted RBP11.4□□□□□ -0.58
APOC1-205ENST00000589781 PTGS1P23219 599 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 PDIA5Q14554 519 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 CEP55Q53EZ4 464 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 LRCH2Q5VUJ6 765 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 SMYD4Q8IYR2 804 aaPredicted RBP11.4□□□□□ -0.58
APOC1-205ENST00000589781 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 LARP4BQ92615 738 aaKnown RBP11.4□□□□□ -0.58
APOC1-205ENST00000589781 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 PPP1R9BQ96SB3 815 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 BPIFA3Q9BQP9 254 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 TINF2Q9BSI4 451 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 KBTBD4Q9NVX7 518 aa11.4□□□□□ -0.58
APOC1-205ENST00000589781 DDX20Q9UHI6 824 aaKnown RBP11.4□□□□□ -0.58
APOC1-205ENST00000589781 DIS3Q9Y2L1 958 aaKnown RBP11.4□□□□□ -0.58
APOC1-205ENST00000589781 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms