RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 HOOK2Q96ED9 719 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.77■□□□□ 0.122e-7■■■□□ 14.8
SMARCA4-214ENST00000589677 USP40Q9NVE5 1235 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 DONSONQ9NYP3 566 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 MLH3Q9UHC1 1453 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 GAS7O60861 476 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 ACTN1P12814 892 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 PCYT1AP49585 367 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 SLC20A2Q08357 652 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 CRLF3Q8IUI8 442 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 GJA10Q969M2 543 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 TEX33O43247 280 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 C1orf146Q5VVC0 180 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 MMS19Q96T76 1030 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 TRIM56Q9BRZ2 755 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 DISC1Q9NRI5 854 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 SNX12Q9UMY4 172 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 JAG2Q9Y219 1238 aa15.77■□□□□ 0.11
SMARCA4-214ENST00000589677 STK36Q9NRP7 1315 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 PRPF6O94906 941 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 AGGF1Q8N302 714 aaeCLIP15.76■□□□□ 0.114e-6■■■■□ 20.3
SMARCA4-214ENST00000589677 C3orf20Q8ND61 904 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 ZC3H12CQ9C0D7 883 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 KIAA1024Q9UPX6 916 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 ESYT3A0FGR9 886 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 WDR91A4D1P6 747 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 K7ENM7 598 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 TTI1O43156 1089 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 STX1BP61266 288 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 OCA2Q04671 838 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 TCIRG1Q13488 830 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 LRRC31Q6UY01 552 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 MAP7D3Q8IWC1 876 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 SEC16BQ96JE7 1060 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 NT5C1BQ96P26 610 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 EYA3Q99504 573 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 LRRC1Q9BTT6 524 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 GCNT4Q9P109 453 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 FAM107AO95990 144 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 ART3Q13508 389 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 LRRC41Q15345 812 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 DDB1Q16531 1140 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 AGBL2Q5U5Z8 902 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 FBXL5Q9UKA1 691 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 P4HA1P13674 534 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 TTC25Q96NG3 672 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 FUT8Q9BYC5 575 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
SMARCA4-214ENST00000589677 TTC26A0AVF1 554 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 LRRC24Q50LG9 513 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 SPATA21Q7Z572 469 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 TMEM51Q9NW97 253 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 PPARGC1AQ9UBK2 798 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 BAG5Q9UL15 447 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 KDM6BO15054 1643 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 WDR19Q8NEZ3 1342 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 H0YCG3 227 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 H7C0C1 242 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 MCF2P10911 925 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 BRAFP15056 766 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 ATP5OP48047 213 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 MRPL47Q9HD33 250 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 AGTP01019 485 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 WDR75Q8IWA0 830 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 RNF34Q969K3 372 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 SGSM3Q96HU1 749 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 CAPN11Q9UMQ6 739 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 A0A1B0GTH6 734 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 HSPA9P38646 679 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 MTF1Q14872 753 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 CSRNP1Q96S65 589 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 MOV10L1Q9BXT6 1211 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 GDAQ9Y2T3 454 aa15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 PRDM15P57071 1507 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-214ENST00000589677 ITIH6Q6UXX5 1313 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 LRRC53A6NM62 1247 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 TOM1L1O75674 476 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 SP4Q02446 784 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 PLCG1P19174 1290 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 EEF1B2P24534 225 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 CHRNA3P32297 505 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 CTSWP56202 376 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 CUL4BQ13620 913 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 DPF2Q92785 391 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 CYFIP2Q96F07 1278 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 UPF3AQ9H1J1 476 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 EMILIN3Q9NT22 766 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 CPP00450 1065 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 A1BGP04217 495 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 PDZD4Q76G19 769 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 PROM2Q8N271 834 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 AIFM3Q96NN9 605 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms