RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-210ENST00000589675 ARHGEF15O94989 841 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-210ENST00000589675 TCF7P36402 384 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-210ENST00000589675 MTMR1Q13613 665 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-210ENST00000589675 UBE2SQ16763 222 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 RTN1Q16799 776 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 ADCK5Q3MIX3 580 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 DBF4BQ8NFT6 615 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 GLT8D2Q9H1C3 349 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 RIC8AQ9NPQ8 531 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 BRPF3Q9ULD4 1205 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
DDX39A-210ENST00000589675 GSTTP1A0A1W2PQM5 241 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 LCHNA4D1U4 455 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 RFXAPO00287 272 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 ERVK-21P61565 698 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 UTP14CQ5TAP6 766 aaKnown RBP12.77□□□□□ -0.37
DDX39A-210ENST00000589675 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 TRIM50Q86XT4 487 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 ARNTL2Q8WYA1 636 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 SEPT8Q92599 483 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 SMARCAD1Q9H4L7 1026 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
DDX39A-210ENST00000589675 BARHL2Q9NY43 387 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 ERAP1Q9NZ08 941 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 TELO2Q9Y4R8 837 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 INSL6Q9Y581 213 aa12.77□□□□□ -0.37
DDX39A-210ENST00000589675 MBLAC1A4D2B0 266 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 STXBP3O00186 592 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 LPXNO60711 386 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 AMHP03971 560 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 RPLP2P05387 115 aaKnown RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 NAPAP54920 295 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 HTRA4P83105 476 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 ARHGAP4P98171 946 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 GRB10Q13322 594 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 TMCO2Q7Z6W1 182 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 APBB2Q92870 758 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 MXRA8Q9BRK3 442 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 CERS4Q9HA82 394 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 KCNH7Q9NS40 1196 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 NFASCO94856 1347 aa12.76□□□□□ -0.37
DDX39A-210ENST00000589675 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-210ENST00000589675 KLF18A0A0U1RQI7 1052 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 CCDC196A0A1B0GTZ2 297 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 GOLGA8AA7E2F4 631 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 GOLGA8BA8MQT2 603 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 CLK2P49760 499 aaKnown RBP12.75□□□□□ -0.37
DDX39A-210ENST00000589675 ADCY7P51828 1080 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 SP4Q02446 784 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 AP3B2Q13367 1082 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 COL4A6Q14031 1691 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 AAK1Q2M2I8 961 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 CEP55Q53EZ4 464 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.75□□□□□ -0.371e-6■■■■□ 20.8
DDX39A-210ENST00000589675 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-210ENST00000589675 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
DDX39A-210ENST00000589675 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 TCEANC2Q96MN5 208 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 JPH1Q9HDC5 661 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-210ENST00000589675 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 COG5Q9UP83 839 aa12.75□□□□□ -0.37
DDX39A-210ENST00000589675 NID2Q14112 1375 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 SMCO2A6NFE2 343 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 MEIS1O00470 390 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 CHRNA1P02708 482 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 CDC27P30260 824 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 HSPA4P34932 840 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 SREBF1P36956 1147 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 PPFIA1Q13136 1202 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 GRIK4Q16099 956 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-210ENST00000589675 MARCH8Q5T0T0 291 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 PLPPR4Q7Z2D5 763 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 SPRED2Q7Z698 418 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 GLG1Q92896 1179 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 AGXT2Q9BYV1 514 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 SUGCTQ9HAC7 445 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 TTC3P53804 2025 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 TCF20Q9UGU0 1960 aaKnown RBP12.74□□□□□ -0.37
DDX39A-210ENST00000589675 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
DDX39A-210ENST00000589675 NLRC5Q86WI3 1866 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms