RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 FAM26DQ5JW98 314 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 TTBK2Q6IQ55 1244 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 RCSD1Q6JBY9 416 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 SEPT14Q6ZU15 432 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 CMTR2Q8IYT2 770 aaKnown RBP7.2□□□□□ -1.26
VPS25-204ENST00000589577 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 FEZF2Q8TBJ5 459 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 ARHGAP45Q92619 1136 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 FRAT1Q92837 279 aaPredicted RBP7.2□□□□□ -1.26
VPS25-204ENST00000589577 ATP6V0A1Q93050 837 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 RNF39Q9H2S5 420 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 CHMP4BQ9H444 224 aaKnown RBP7.2□□□□□ -1.26
VPS25-204ENST00000589577 C1orf115Q9H7X2 142 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 EHMT1Q9H9B1 1298 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 SH2B1Q9NRF2 756 aaPredicted RBP7.2□□□□□ -1.26
VPS25-204ENST00000589577 COL20A1Q9P218 1284 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 DDX41Q9UJV9 622 aaKnown RBP7.2□□□□□ -1.26
VPS25-204ENST00000589577 CNOT1A5YKK6 2376 aaKnown RBP7.2□□□□□ -1.26
VPS25-204ENST00000589577 DMXL2Q8TDJ6 3036 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 KAT6AQ92794 2004 aa7.2□□□□□ -1.26
VPS25-204ENST00000589577 BPTFQ12830 3046 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 MYH6P13533 1939 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 MIA3Q5JRA6 1907 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 C17orf102A2RUQ5 167 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 MINDY4BA8MYZ0 360 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 PPFIA3O75145 1194 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 CHRNA1P02708 482 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 WEE2P0C1S8 567 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 SP9P0CG40 484 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 GHRP10912 638 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 TGM1P22735 817 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 GATMP50440 423 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 RARSP54136 660 aaKnown RBP7.19□□□□□ -1.26
VPS25-204ENST00000589577 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
VPS25-204ENST00000589577 LPIN1Q14693 890 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 UBE3CQ15386 1083 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 HSDL1Q3SXM5 330 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 ZKSCAN2Q63HK3 967 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 LLGL2Q6P1M3 1020 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 ZDHHC14Q8IZN3 488 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 SIX5Q8N196 739 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 RASGRP4Q8TDF6 673 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 DDRGK1Q96HY6 314 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 STRBPQ96SI9 672 aaKnown RBP7.19□□□□□ -1.26
VPS25-204ENST00000589577 CDCA3Q99618 268 aaPredicted RBP7.19□□□□□ -1.26
VPS25-204ENST00000589577 RTP3Q9BQQ7 232 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 IL1RAPL2Q9NP60 686 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 PAG1Q9NWQ8 432 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 DLGAP2Q9P1A6 1054 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 LIMD1Q9UGP4 676 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 SUPT16HQ9Y5B9 1047 aaKnown RBP7.19□□□□□ -1.26
VPS25-204ENST00000589577 COL4A3Q01955 1670 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 AKAP13Q12802 2813 aa7.19□□□□□ -1.26
VPS25-204ENST00000589577 KRBA1A5PL33 1030 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 POTEMA6NI47 508 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 SORBS3O60504 671 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 NMT2O60551 498 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 SMIM10L2AP0DMW4 78 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 SMIM10L2BP0DMW5 78 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 ADAM17P78536 824 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 MGAT3Q09327 533 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 PAN2Q504Q3 1202 aaKnown RBP7.18□□□□□ -1.26
VPS25-204ENST00000589577 POTEGQ6S5H5 508 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 BTNL9Q6UXG8 535 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 RTN4RL1Q86UN2 441 aaPredicted RBP7.18□□□□□ -1.26
VPS25-204ENST00000589577 MAML2Q8IZL2 1156 aaPredicted RBP7.18□□□□□ -1.26
VPS25-204ENST00000589577 ZNF444Q8N0Y2 327 aaPredicted RBP7.18□□□□□ -1.26
VPS25-204ENST00000589577 TBC1D5Q92609 795 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 RNPEPQ9H4A4 650 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 IL17RBQ9NRM6 502 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 HCSTQ9UBK5 93 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 CDV3Q9UKY7 258 aaKnown RBP7.18□□□□□ -1.26
VPS25-204ENST00000589577 EXOC6BQ9Y2D4 811 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 LAMA1P25391 3075 aa7.18□□□□□ -1.26
VPS25-204ENST00000589577 DOCK8Q8NF50 2099 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 HIDE1A8MVS5 230 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 PPFIA4O75335 1185 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 FGF18O76093 207 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 TSPY3P0CV98 308 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 TSPY8P0CW00 308 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 HOXB8P17481 243 aaPredicted RBP7.17□□□□□ -1.26
VPS25-204ENST00000589577 SDHBP21912 280 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 NOVP48745 357 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 TFAP4Q01664 338 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 UBE3AQ05086 875 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 APOBRQ0VD83 1088 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 LAMC2Q13753 1193 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 PPM1JQ5JR12 505 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 SYDE2Q5VT97 1194 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 MYSM1Q5VVJ2 828 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 GIMAP6Q6P9H5 292 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 ZC3H14Q6PJT7 736 aaKnown RBP7.17□□□□□ -1.26
VPS25-204ENST00000589577 TDRD5Q8NAT2 981 aaKnown RBP7.17□□□□□ -1.26
VPS25-204ENST00000589577 MICAL1Q8TDZ2 1067 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 TAAR1Q96RJ0 339 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 MPHOSPH6Q99547 160 aaKnown RBP7.17□□□□□ -1.26
VPS25-204ENST00000589577 RTKNQ9BST9 563 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms