RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 C6orf50Q9HD87 102 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 HDAC6Q9UBN7 1215 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 EVPLQ92817 2033 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 ESYT2A0FGR8 921 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 C17orf102A2RUQ5 167 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 H3BRB1 525 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 CPLX1O14810 134 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 PRPF3O43395 683 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 GPR37L1O60883 481 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 SELPP16109 830 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 IGFBP4P22692 258 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 GNA11P29992 359 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 ZNF76P36508 570 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 SP2Q02086 613 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 SP4Q02446 784 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 RBL2Q08999 1139 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 LRRC8DQ7L1W4 858 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 GPR20Q99678 358 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 SDF4Q9BRK5 362 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 FTOQ9C0B1 505 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 MSRAQ9UJ68 235 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 NLRC5Q86WI3 1866 aa12.1□□□□□ -0.47
CLPTM1-211ENST00000589347 PRRC2BQ5JSZ5 2229 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 CDKL5O76039 1030 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 IQCF3P0C7M6 154 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 KCNA2P16389 499 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 ADD1P35611 737 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 SREBF1P36956 1147 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 KCNJ6P48051 423 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 SETQ01105 290 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 UTP14CQ5TAP6 766 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 REXO1Q8N1G1 1221 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 TNPO1Q92973 898 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 SLC9A7Q96T83 725 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 MXRA8Q9BRK3 442 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 C16orf70Q9BSU1 422 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 JPH1Q9HDC5 661 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 EMSYQ7Z589 1322 aa12.09□□□□□ -0.47
CLPTM1-211ENST00000589347 COL4A4P53420 1690 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 CAND2O75155 1236 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 SMIM10L2AP0DMW4 78 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 SMIM10L2BP0DMW5 78 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 IFNAR1P17181 557 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 ITGB5P18084 799 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 ANAPC15P60006 121 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 ALYREFQ86V81 257 aaKnown RBP12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 NKX2-4Q9H2Z4 354 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 PDRG1Q9NUG6 133 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 ERAP1Q9NZ08 941 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 PKD2L1Q9P0L9 805 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 YBX2Q9Y2T7 364 aaKnown RBP12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 RALGAPA2Q2PPJ7 1873 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 NFASCO94856 1347 aa12.08□□□□□ -0.48
CLPTM1-211ENST00000589347 EFCAB14O75071 495 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 DEXIO95424 95 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 CKBP12277 381 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 ATP2A2P16615 1042 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 EVCP57679 992 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 ARHGAP4P98171 946 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 CEP55Q53EZ4 464 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 NIPA1Q7RTP0 329 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 FAM177A1Q8N128 213 aaPredicted RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 SEPT1Q8WYJ6 367 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 GLG1Q92896 1179 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 PHKBQ93100 1093 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 PGBD1Q96JS3 809 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 C22orf23Q9BZE7 217 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 AZI2Q9H6S1 392 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 SLC28A3Q9HAS3 691 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms