RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	RMDN3	Q96TC7	470 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	ZNF577	Q9BSK1	485 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	WDR11	Q9BZH6	1224 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	IFNK	Q9P0W0	207 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	BTBD7	Q9P203	1132 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	STX17	P56962	302 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	EHHADH	Q08426	723 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	RAD51AP2	Q09MP3	1159 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	NAA30	Q147X3	362 aa	Predicted RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	PLCD3	Q8N3E9	789 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	DNAJC19	Q96DA6	116 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	POLR3C	Q9BUI4	534 aa	Predicted RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	XPO4	Q9C0E2	1151 aa	Known RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	RASSF4	Q9H2L5	321 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	ACAD9	Q9H845	621 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	A1CF	Q9NQ94	594 aa	Known RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	KCNH7	Q9NS40	1196 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	SAMSN1	Q9NSI8	373 aa	Known RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	CYP39A1	Q9NYL5	469 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	CTNND2	Q9UQB3	1225 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	CLEC11A	Q9Y240	323 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	KIAA1217	Q5T5P2	1943 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	IPO5	O00410	1097 aa	Known RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	TNNT3	P45378	269 aa	Predicted RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	KCNJ6	P48051	423 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	GSDMD	P57764	484 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	PDE4D	Q08499	809 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	ELF2	Q15723	593 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	SPATA1	Q5VX52	437 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	UNC13D	Q70J99	1090 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	ZNF592	Q92610	1267 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	DDX12P	Q92771	950 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	HSD17B14	Q9BPX1	270 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	EIF2AK1	Q9BQI3	630 aa	Known RBP	17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	JADE2	Q9NQC1	790 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	RWDD2A	Q9UIY3	292 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	AGTPBP1	Q9UPW5	1226 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	MAPK8IP1	Q9UQF2	711 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	STK24	Q9Y6E0	443 aa		17.13	■□□□□ 0.33
DDX39A-209	ENST00000589318	PVALEF	A0A1B0GWK0	134 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	DHX15	O43143	795 aa	Known RBP	17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	GAS7	O60861	476 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	PLA2G4B	P0C869	781 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	FCER1A	P12319	257 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	SLC12A3	P55017	1021 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	PSMC6	P62333	389 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	STK4	Q13043	487 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	PLS1	Q14651	629 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	DYM	Q7RTS9	669 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	RIT2	Q99578	217 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	MAF1	Q9H063	256 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	ASCC2	Q9H1I8	757 aa	Predicted RBP	17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	UNC45A	Q9H3U1	944 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	EXOC1	Q9NV70	894 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	RGL1	Q9NZL6	768 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	NRBP1	Q9UHY1	535 aa		17.12	■□□□□ 0.33
DDX39A-209	ENST00000589318	COBL	O75128	1261 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	CYP4A11	Q02928	519 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	PAK1	Q13153	545 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	ITGB3BP	Q13352	177 aa	Predicted RBP	17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	HSP90AA4P	Q58FG1	418 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	CDKAL1	Q5VV42	579 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	MB21D1	Q8N884	522 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	KIAA0895	Q8NCT3	520 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	NELFB	Q8WX92	580 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	AGO4	Q9HCK5	861 aa	Known RBP	17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	GEMIN8	Q9NWZ8	242 aa	Known RBP	17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	CYP11B2	P19099	503 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	CCDC144B	Q3MJ40	725 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	COBLL1	Q53SF7	1204 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	ARHGEF16	Q5VV41	709 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	GPAT2	Q6NUI2	795 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	CCAR2	Q8N163	923 aa	Known RBP	17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	HPS3	Q969F9	1004 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	SRRT	Q9BXP5	876 aa	Known RBP	17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	LRRC27	Q9C0I9	530 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	FHOD1	Q9Y613	1164 aa		17.11	■□□□□ 0.33
DDX39A-209	ENST00000589318	CHMP2A	O43633	222 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	CNMD	O75829	334 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	SLITRK3	O94933	977 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	PMS1	P54277	932 aa	Known RBP	17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	HERVK_113	P62684	666 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	MTMR1	Q13613	665 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	ARSH	Q5FYA8	562 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	APTX	Q7Z2E3	356 aa	Known RBP	17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	VSIG10L	Q86VR7	867 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	RIOX2	Q8IUF8	465 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	CHST13	Q8NET6	341 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	TEKT3	Q9BXF9	490 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	RRAGC	Q9HB90	399 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	INTS13	Q9NVM9	706 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	ZNF446	Q9NWS9	450 aa		17.1	■□□□□ 0.33
DDX39A-209	ENST00000589318	UNCX	A6NJT0	531 aa		17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	CCP110	O43303	1012 aa		17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	MYCL	P12524	364 aa	Predicted RBP	17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	SKIL	P12757	684 aa		17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	XRRA1	Q6P2D8	792 aa		17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	CCDC47	Q96A33	483 aa	Known RBP	17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	DYDC2	Q96IM9	177 aa		17.09	■□□□□ 0.33
DDX39A-209	ENST00000589318	ZNF408	Q9H9D4	720 aa		17.09	■□□□□ 0.33

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms