RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 KANSL3Q9P2N6 904 aa6.69□□□□□ -1.34
LINC01539-202ENST00000589293 TMX2Q9Y320 296 aa6.69□□□□□ -1.34
LINC01539-202ENST00000589293 RANBP2P49792 3224 aaKnown RBP6.69□□□□□ -1.34
LINC01539-202ENST00000589293 MROH7Q68CQ1 1323 aa6.69□□□□□ -1.34
LINC01539-202ENST00000589293 FOCADQ5VW36 1801 aa6.69□□□□□ -1.34
LINC01539-202ENST00000589293 CUL9Q8IWT3 2517 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 TMEM265A0A087WTH1 108 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 TLR3O15455 904 aaKnown RBP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 COBLO75128 1261 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 ZBED4O75132 1171 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 RAB11FIP3O75154 756 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 MBD4O95243 580 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 PCSK2P16519 638 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 SOX18P35713 384 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 GABPAQ06546 454 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 FAM47AQ5JRC9 791 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 PRAMEF19Q5SWL8 479 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 ADAMTSL4Q6UY14 1074 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 LCORLQ8N3X6 602 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 TRPV1Q8NER1 839 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 SNX29Q8TEQ0 813 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 MYLIPQ8WY64 445 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 GPATCH3Q96I76 525 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 GLT1D1Q96MS3 346 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 TINF2Q9BSI4 451 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 MTIF3Q9H2K0 278 aaKnown RBP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 SEMA6BQ9H3T3 888 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 ARMT1Q9H993 441 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 RNF19AQ9NV58 838 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 PAG1Q9NWQ8 432 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 ZHX1Q9UKY1 873 aaPredicted RBP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 FAM184BQ9ULE4 1060 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 DIS3Q9Y2L1 958 aaKnown RBP6.68□□□□□ -1.34
LINC01539-202ENST00000589293 SLC4A4Q9Y6R1 1079 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 SIPA1L1O43166 1804 aa6.68□□□□□ -1.34
LINC01539-202ENST00000589293 CDK5RAP2Q96SN8 1893 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 A0A1W2PQ45 241 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 A0A1W2PQY0 241 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 A0A1W2PRG0 241 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 J3QW42 95 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 OIP5O43482 229 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 ARHGEF15O94989 841 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 KIF4AO95239 1232 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 PGK1P00558 417 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 PGK2P07205 417 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 CYP2D6P10635 497 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 EEF2P13639 858 aaKnown RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 AKR1B1P15121 316 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 GUCY1A2P33402 732 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 ADH7P40394 386 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 CDK8P49336 464 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 NRLP54845 237 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 GPLD1P80108 840 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 IKQ13123 557 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 LRRFIP1Q32MZ4 808 aaKnown RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 C9orf50Q5SZB4 431 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 PEAR1Q5VY43 1037 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 SNRNP48Q6IEG0 339 aaKnown RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 HFE2Q6ZVN8 426 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 NOL8Q76FK4 1167 aaKnown RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 RIOX2Q8IUF8 465 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 ANKRD35Q8N283 1001 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 GOLGA6L1Q8N7Z2 621 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 PCSK9Q8NBP7 692 aaKnown RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 SLC44A5Q8NCS7 719 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 RGS22Q8NE09 1264 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 DYNLL2Q96FJ2 89 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 SLF1Q9BQI6 1058 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 TEX13BQ9BXU2 312 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 BOLA2Q9H3K6 86 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 IGFLR1Q9H665 355 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 LATS2Q9NRM7 1088 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 ARPP21Q9UBL0 812 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 SALL4Q9UJQ4 1053 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 GDF2Q9UK05 429 aaPredicted RBP6.67□□□□□ -1.34
LINC01539-202ENST00000589293 DDX19BQ9UMR2 479 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 SLC6A14Q9UN76 642 aa6.67□□□□□ -1.34
LINC01539-202ENST00000589293 NAV1Q8NEY1 1877 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
LINC01539-202ENST00000589293 ELOA3DA6NLF2 546 aaPredicted RBP6.66□□□□□ -1.34
LINC01539-202ENST00000589293 MINDY4BA8MYZ0 360 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 VWA5AO00534 786 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 EIF1AYO14602 144 aaKnown RBP6.66□□□□□ -1.34
LINC01539-202ENST00000589293 APPP05067 770 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 SLC3A2P08195 630 aaKnown RBP6.66□□□□□ -1.34
LINC01539-202ENST00000589293 C6orf222P0C671 652 aaPredicted RBP6.66□□□□□ -1.34
LINC01539-202ENST00000589293 IRS1P35568 1242 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 ADD2P35612 726 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 ACLYP53396 1101 aa6.66□□□□□ -1.34
LINC01539-202ENST00000589293 PPIGQ13427 754 aaKnown RBP eCLIP6.66□□□□□ -1.34
LINC01539-202ENST00000589293 SNX17Q15036 470 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms