RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ADAM17P78536 824 aa17.5■□□□□ 0.39
SF3A2-204ENST00000589118 ADAM15Q13444 863 aa17.5■□□□□ 0.39
SF3A2-204ENST00000589118 HERC4Q5GLZ8 1057 aaPredicted RBP17.5■□□□□ 0.39
SF3A2-204ENST00000589118 FAM26DQ5JW98 314 aa17.5■□□□□ 0.39
SF3A2-204ENST00000589118 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
SF3A2-204ENST00000589118 MFSD14AQ96MC6 490 aa17.5■□□□□ 0.39
SF3A2-204ENST00000589118 UPF3BQ9BZI7 483 aaKnown RBP17.5■□□□□ 0.39
SF3A2-204ENST00000589118 C5orf67F2Z3F1 127 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 GCOM1H8Y6P7 765 aaPredicted RBP17.49■□□□□ 0.39
SF3A2-204ENST00000589118 POLR2MP0CAP2 368 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 TGFB3P10600 412 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 BTG3Q14201 252 aaPredicted RBP17.49■□□□□ 0.39
SF3A2-204ENST00000589118 LPIN1Q14693 890 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 CCDC178Q5BJE1 867 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 IFIT1BQ5T764 474 aaKnown RBP17.49■□□□□ 0.39
SF3A2-204ENST00000589118 RBM23Q86U06 439 aaKnown RBP17.49■□□□□ 0.39
SF3A2-204ENST00000589118 EDAQ92838 391 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 IL25Q9H293 177 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 RC3H2Q9HBD1 1191 aaKnown RBP17.49■□□□□ 0.39
SF3A2-204ENST00000589118 FAM86C1Q9NVL1 165 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 CD207Q9UJ71 328 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 PLXNA4Q9HCM2 1894 aa17.49■□□□□ 0.39
SF3A2-204ENST00000589118 ADGRA3Q8IWK6 1321 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-204ENST00000589118 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 CYTH3O43739 400 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 IBSPP21815 317 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-204ENST00000589118 GATMP50440 423 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 RBM10P98175 930 aaKnown RBP17.48■□□□□ 0.39
SF3A2-204ENST00000589118 SEC23AQ15436 765 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 RTN4RL1Q86UN2 441 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-204ENST00000589118 LINC01599Q8WXQ3 324 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 SNX27Q96L92 541 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-204ENST00000589118 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 EHMT1Q9H9B1 1298 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 CLEC1BQ9P126 229 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 PLAGL2Q9UPG8 496 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 MRPL42Q9Y6G3 142 aaKnown RBP17.48■□□□□ 0.39
SF3A2-204ENST00000589118 TTC3P53804 2025 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 KMT2EQ8IZD2 1858 aa17.48■□□□□ 0.39
SF3A2-204ENST00000589118 RB1P06400 928 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 MARK3P27448 753 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 NDUFV1P49821 464 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 MGAT3Q09327 533 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 SMAD4Q13485 552 aaKnown RBP17.47■□□□□ 0.39
SF3A2-204ENST00000589118 PAN2Q504Q3 1202 aaKnown RBP17.47■□□□□ 0.39
SF3A2-204ENST00000589118 DNAJB3Q8WWF6 145 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 APBB2Q92870 758 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 PBXIP1Q96AQ6 731 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 ZNF689Q96CS4 500 aaPredicted RBP17.47■□□□□ 0.39
SF3A2-204ENST00000589118 UBAC1Q9BSL1 405 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 KCNH6Q9H252 994 aa17.47■□□□□ 0.39
SF3A2-204ENST00000589118 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
SF3A2-204ENST00000589118 TMEM221A6NGB7 291 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 M0R296 226 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 CAND2O75155 1236 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 DGKIO75912 1065 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 ITGB1P05556 798 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 GNAT1P11488 350 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 ICAM3P32942 547 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.39
SF3A2-204ENST00000589118 METTL7BQ6UX53 244 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 TRIM67Q6ZTA4 783 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 CLP1Q92989 425 aaKnown RBP17.46■□□□□ 0.39
SF3A2-204ENST00000589118 MSLNLQ96KJ4 702 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 INPP4AQ96PE3 977 aaPredicted RBP17.46■□□□□ 0.39
SF3A2-204ENST00000589118 LMAN2LQ9H0V9 348 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 MAP3K20Q9NYL2 800 aaKnown RBP17.46■□□□□ 0.39
SF3A2-204ENST00000589118 PKD2L1Q9P0L9 805 aa17.46■□□□□ 0.39
SF3A2-204ENST00000589118 BARX2Q9UMQ3 279 aaPredicted RBP17.46■□□□□ 0.39
SF3A2-204ENST00000589118 NCK2O43639 380 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 ATP9AO75110 1047 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 MMP1P03956 469 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 CD52P31358 61 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 MFAP1P55081 439 aaKnown RBP17.45■□□□□ 0.38
SF3A2-204ENST00000589118 TMEM62Q0P6H9 643 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 TCF15Q12870 199 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 NEDD9Q14511 834 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 IMMTQ16891 758 aaKnown RBP17.45■□□□□ 0.38
SF3A2-204ENST00000589118 USP17L6PQ6QN14 398 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 SPPL3Q8TCT6 385 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 RIOX1Q9H6W3 641 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 CDY2AQ9Y6F7 541 aa17.45■□□□□ 0.38
SF3A2-204ENST00000589118 GLP2RO95838 553 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 TCF7P36402 384 aaPredicted RBP17.44■□□□□ 0.38
SF3A2-204ENST00000589118 NRIP1P48552 1158 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 IGBP1P78318 339 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 GRM4Q14833 912 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 FBXO47Q5MNV8 452 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 MARCH8Q5T0T0 291 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 PLEKHM2Q8IWE5 1019 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 KLHL23Q8NBE8 558 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 POP1Q99575 1024 aaKnown RBP17.44■□□□□ 0.38
SF3A2-204ENST00000589118 KRT23Q9C075 422 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 DIAPH3Q9NSV4 1193 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 TAF6LQ9Y6J9 622 aa17.44■□□□□ 0.38
SF3A2-204ENST00000589118 USP34Q70CQ2 3546 aa17.43■□□□□ 0.38
SF3A2-204ENST00000589118 GSTTP1A0A1W2PQM5 241 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms