RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LMF1Q96S06 567 aa5.2□□□□□ -1.58
SMAD4-207ENST00000589076 CSRNP2Q9H175 543 aa5.2□□□□□ -1.58
SMAD4-207ENST00000589076 DLL4Q9NR61 685 aa5.2□□□□□ -1.58
SMAD4-207ENST00000589076 WDR33Q9C0J8 1336 aaKnown RBP5.2□□□□□ -1.58
SMAD4-207ENST00000589076 LRG1P02750 347 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 PURAQ00577 322 aaKnown RBP5.19□□□□□ -1.58
SMAD4-207ENST00000589076 ABHD18Q0P651 414 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 R3HDM1Q15032 1099 aaKnown RBP5.19□□□□□ -1.58
SMAD4-207ENST00000589076 SMAD2Q15796 467 aaKnown RBP5.19□□□□□ -1.58
SMAD4-207ENST00000589076 DDR2Q16832 855 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 LARP1BQ659C4 914 aaKnown RBP5.19□□□□□ -1.58
SMAD4-207ENST00000589076 RCBTB1Q8NDN9 531 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMAD4-207ENST00000589076 MRFAP1L1Q96HT8 127 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 PTPN18Q99952 460 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 CCDC113Q9H0I3 377 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 HSPBP1Q9NZL4 362 aa5.19□□□□□ -1.58
SMAD4-207ENST00000589076 CDK11AQ9UQ88 783 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-207ENST00000589076 SCG5P05408 212 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 FOXE3Q13461 319 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 NRN1LQ496H8 165 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 Q6ZUG5 572 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 CCDC103Q8IW40 242 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 ADOQ96SZ5 270 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 MEGF9Q9H1U4 602 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 ST7Q9NRC1 585 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 C11orf21Q9P2W6 132 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 MSRB2Q9Y3D2 182 aa5.18□□□□□ -1.58
SMAD4-207ENST00000589076 NPIPB8E9PQR5 432 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 AGRPO00253 132 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 DDAH1O94760 285 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 ITGAVP06756 1048 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 MCM7P33993 719 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 BMS1Q14692 1282 aaKnown RBP5.17□□□□□ -1.58
SMAD4-207ENST00000589076 TESK1Q15569 626 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 REXO1L1PQ8IX06 675 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 CELF2-AS1Q8N7Q2 184 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 NUDT10Q8NFP7 164 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 TTLL11Q8NHH1 800 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 NUDT11Q96G61 164 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 WWC2-AS2Q96NR7 200 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 LRRC37BQ96QE4 947 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 SRPK1Q96SB4 655 aaKnown RBP5.17□□□□□ -1.58
SMAD4-207ENST00000589076 TMEFF2Q9UIK5 374 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-207ENST00000589076 SLC4A7Q9Y6M7 1214 aa5.17□□□□□ -1.58
SMAD4-207ENST00000589076 CNOT4O95628 575 aaKnown RBP5.16□□□□□ -1.58
SMAD4-207ENST00000589076 RASGRF1Q13972 1273 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 SMN1Q16637 294 aaKnown RBP5.16□□□□□ -1.58
SMAD4-207ENST00000589076 GIMAP6Q6P9H5 292 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 RNF207Q6ZRF8 634 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 ZNF227Q86WZ6 799 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 FAM178BQ8IXR5 827 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 MICAL1Q8TDZ2 1067 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 GNRHR2Q96P88 292 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 DEPDC7Q96QD5 511 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 PIF1Q9H611 641 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 ARHGAP20Q9P2F6 1191 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 ASH2LQ9UBL3 628 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 ING1Q9UK53 422 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-207ENST00000589076 ZFR2Q9UPR6 939 aaKnown RBP5.16□□□□□ -1.58
SMAD4-207ENST00000589076 CADPSQ9ULU8 1353 aa5.16□□□□□ -1.58
SMAD4-207ENST00000589076 TLDC2A0PJX2 215 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 PDPK1O15530 556 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 KLHL18O94889 574 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 ZNF202O95125 648 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 GJB6O95452 261 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 ENO2P09104 434 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-207ENST00000589076 COMTP21964 271 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 RASA3Q14644 834 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 USP10Q14694 798 aaKnown RBP5.15□□□□□ -1.59
SMAD4-207ENST00000589076 TCTN3Q6NUS6 607 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 C6orf15Q6UXA7 325 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-207ENST00000589076 TAX1BP1Q86VP1 789 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 DTX3Q8N9I9 347 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 SLC6A20Q9NP91 592 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 SNTG2Q9NY99 539 aa5.15□□□□□ -1.59
SMAD4-207ENST00000589076 H0Y858 1186 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 INHBEP58166 350 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 RAC3P60763 192 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 SPIRE1Q08AE8 756 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 IFRD2Q12894 506 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-207ENST00000589076 USP39Q53GS9 565 aaKnown RBP5.14□□□□□ -1.59
SMAD4-207ENST00000589076 MIIPQ5JXC2 388 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 EEPD1Q7L9B9 569 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 KREMEN2Q8NCW0 462 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 EDAQ92838 391 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 ZNF669Q96BR6 464 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-207ENST00000589076 FAM89AQ96GI7 184 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 LGR4Q9BXB1 951 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 ZFP69BQ9UJL9 534 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 FBXL7Q9UJT9 491 aa5.14□□□□□ -1.59
SMAD4-207ENST00000589076 TMA7Q9Y2S6 64 aaKnown RBP5.14□□□□□ -1.59
SMAD4-207ENST00000589076 FAM221BA6H8Z2 402 aa5.13□□□□□ -1.59
SMAD4-207ENST00000589076 CCDC85CA6NKD9 419 aa5.13□□□□□ -1.59
SMAD4-207ENST00000589076 SLC27A2O14975 620 aa5.13□□□□□ -1.59
SMAD4-207ENST00000589076 FOXS1O43638 330 aa5.13□□□□□ -1.59
SMAD4-207ENST00000589076 KNG1P01042 644 aa5.13□□□□□ -1.59
SMAD4-207ENST00000589076 CKMP06732 381 aa5.13□□□□□ -1.59
SMAD4-207ENST00000589076 COL6A1P12109 1028 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms