RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KCNA2P16389 499 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 ANP32AP39687 249 aaKnown RBP13.2□□□□□ -0.3
RFX1-204ENST00000588885 RCAN1P53805 252 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 STK3Q13188 491 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
RFX1-204ENST00000588885 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 CCDC155Q8N6L0 562 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 MXRA8Q9BRK3 442 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 JADE2Q9NQC1 790 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 TREHO43280 583 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
RFX1-204ENST00000588885 ARP10275 920 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
RFX1-204ENST00000588885 ZNF76P36508 570 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 THPOP40225 353 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 PTK7Q13308 1070 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 GPNMBQ14956 572 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 RABEP1Q15276 862 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 PKN1Q16512 942 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 ZNF618Q5T7W0 954 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 LRRC8DQ7L1W4 858 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 GIMAP8Q8ND71 665 aaPredicted RBP13.19□□□□□ -0.3
RFX1-204ENST00000588885 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 AFAP1L1Q8TED9 768 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 ATP6V0A1Q93050 837 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
RFX1-204ENST00000588885 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 ZNF576Q9H609 170 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 YBX2Q9Y2T7 364 aaKnown RBP13.19□□□□□ -0.3
RFX1-204ENST00000588885 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
RFX1-204ENST00000588885 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 NBNO60934 754 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 DTNBO60941 627 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
RFX1-204ENST00000588885 PFKMP08237 780 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 ACTN1P12814 892 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
RFX1-204ENST00000588885 MARK3P27448 753 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 RFC2P35250 354 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 NTRK3Q16288 839 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
RFX1-204ENST00000588885 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 SEPT1Q8WYJ6 367 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 GLG1Q92896 1179 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
RFX1-204ENST00000588885 UNC80Q8N2C7 3258 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 DDX39AO00148 427 aaKnown RBP13.17□□□□□ -0.3
RFX1-204ENST00000588885 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
RFX1-204ENST00000588885 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 RAB30Q15771 203 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 TCTN1Q2MV58 587 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
RFX1-204ENST00000588885 SERINC5Q86VE9 423 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
RFX1-204ENST00000588885 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 VPS54Q9P1Q0 977 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 CHD7Q9P2D1 2997 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 ZNF215Q9UL58 517 aaPredicted RBP13.17□□□□□ -0.3
RFX1-204ENST00000588885 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
RFX1-204ENST00000588885 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 CPLX1O14810 134 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 MAFGO15525 162 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
RFX1-204ENST00000588885 CTSHP09668 335 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 IFNAR1P17181 557 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 SREBF1P36956 1147 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 EVCP57679 992 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 IGBP1P78318 339 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
RFX1-204ENST00000588885 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
RFX1-204ENST00000588885 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
RFX1-204ENST00000588885 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 ZMYND12Q9H0C1 365 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 PRDM12Q9H4Q4 367 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
RFX1-204ENST00000588885 JPH1Q9HDC5 661 aaPredicted RBP13.16□□□□□ -0.3
RFX1-204ENST00000588885 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
RFX1-204ENST00000588885 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms