RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 CCDC39Q9UFE4 941 aa25.42■■□□□ 1.66
ACTN4-210ENST00000588618 RBM47A0AV96 593 aaKnown RBP25.41■■□□□ 1.66
ACTN4-210ENST00000588618 WDR64B1ANS9 1081 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 CCNE2O96020 404 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 SFNP31947 248 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 JAK3P52333 1124 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 KARSQ15046 597 aaKnown RBP25.41■■□□□ 1.66
ACTN4-210ENST00000588618 ZNF746Q6NUN9 644 aaPredicted RBP25.41■■□□□ 1.66
ACTN4-210ENST00000588618 DHX37Q8IY37 1157 aaKnown RBP25.41■■□□□ 1.66
ACTN4-210ENST00000588618 CALML4Q96GE6 196 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 CCSER1Q9C0I3 900 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 KCNH3Q9ULD8 1083 aa25.41■■□□□ 1.66
ACTN4-210ENST00000588618 ELNP15502 786 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 METTL7BQ6UX53 244 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 SMAP1Q8IYB5 467 aaPredicted RBP25.4■■□□□ 1.66
ACTN4-210ENST00000588618 PDILTQ8N807 584 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 PXYLP1Q8TE99 480 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 PYM1Q9BRP8 204 aaKnown RBP25.4■■□□□ 1.66
ACTN4-210ENST00000588618 NOP56O00567 594 aaKnown RBP25.4■■□□□ 1.66
ACTN4-210ENST00000588618 HMGCRP04035 888 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 SYKP43405 635 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 ECM1Q16610 540 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 SKOR2Q2VWA4 1001 aaPredicted RBP25.4■■□□□ 1.66
ACTN4-210ENST00000588618 SLAIN1Q8ND83 568 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 DISC1Q9NRI5 854 aa25.4■■□□□ 1.66
ACTN4-210ENST00000588618 KDM3AQ9Y4C1 1321 aa25.39■■□□□ 1.66
ACTN4-210ENST00000588618 NKRFO15226 690 aaKnown RBP eCLIP25.39■■□□□ 1.651e-6■■■■□ 25.7
ACTN4-210ENST00000588618 POLR2DO15514 142 aaKnown RBP25.39■■□□□ 1.65
ACTN4-210ENST00000588618 FARP2O94887 1054 aaPredicted RBP25.39■■□□□ 1.65
ACTN4-210ENST00000588618 ZNF865P0CJ78 1059 aaPredicted RBP25.39■■□□□ 1.65
ACTN4-210ENST00000588618 CCT6AP40227 531 aaKnown RBP25.39■■□□□ 1.65
ACTN4-210ENST00000588618 TNFAIP2Q03169 654 aa25.39■■□□□ 1.65
ACTN4-210ENST00000588618 CELF3Q5SZQ8 465 aaKnown RBP25.39■■□□□ 1.65
ACTN4-210ENST00000588618 TMEM63CQ9P1W3 806 aa25.39■■□□□ 1.65
ACTN4-210ENST00000588618 FAM184BQ9ULE4 1060 aa25.39■■□□□ 1.65
ACTN4-210ENST00000588618 GH1P01241 217 aa25.38■■□□□ 1.65
ACTN4-210ENST00000588618 DUSP28Q4G0W2 176 aa25.38■■□□□ 1.65
ACTN4-210ENST00000588618 RDM1Q8NG50 284 aa25.38■■□□□ 1.65
ACTN4-210ENST00000588618 COPS5Q92905 334 aa25.38■■□□□ 1.65
ACTN4-210ENST00000588618 PNMA5Q96PV4 448 aa25.38■■□□□ 1.65
ACTN4-210ENST00000588618 PLIN2Q99541 437 aa25.38■■□□□ 1.65
ACTN4-210ENST00000588618 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 ADCY6O43306 1168 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 MED24O75448 989 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 ZNF202O95125 648 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 HSPA1AP0DMV8 641 aaKnown RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 HSPA1BP0DMV9 641 aaKnown RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 AKR1A1P14550 325 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 CNGA1P29973 690 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 GRB10Q13322 594 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 LAMC2Q13753 1193 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 EPHA7Q15375 998 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 E2F4Q16254 413 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 GJC2Q5T442 439 aaPredicted RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 NEK9Q8TD19 979 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 SPATA33Q96N06 139 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 EIF2AK1Q9BQI3 630 aaKnown RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 PCDHA10Q9Y5I2 948 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 FOXN1O15353 648 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 KINO60870 393 aaKnown RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 SPATA31C1P0DKV0 1188 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 PRKAR2AP13861 404 aaKnown RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 SMPD1P17405 629 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 CTCFP49711 727 aaPredicted RBP25.37■■□□□ 1.65
ACTN4-210ENST00000588618 ACTR2P61160 394 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 LONRF3Q496Y0 759 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 NAALADL2Q58DX5 795 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 MIS18BP1Q6P0N0 1132 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 NT5C3AQ9H0P0 336 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 RGL1Q9NZL6 768 aa25.37■■□□□ 1.65
ACTN4-210ENST00000588618 SLC26A4O43511 780 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 PSAPP07602 524 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 HSPA8P11142 646 aaKnown RBP25.36■■□□□ 1.65
ACTN4-210ENST00000588618 CYBAP13498 195 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 GRK4P32298 578 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 CYP4A11Q02928 519 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 RRAGBQ5VZM2 374 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 CAVIN1Q6NZI2 390 aaKnown RBP25.36■■□□□ 1.65
ACTN4-210ENST00000588618 IQUBQ8NA54 791 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 CCDC34Q96HJ3 373 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 PTCH2Q9Y6C5 1203 aa25.36■■□□□ 1.65
ACTN4-210ENST00000588618 POTEB3A0JP26 581 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 ACTN4O43707 911 aaKnown RBP25.35■■□□□ 1.65
ACTN4-210ENST00000588618 RPA1P27694 616 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 STAT6P42226 847 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 CACNB2Q08289 660 aaPredicted RBP25.35■■□□□ 1.65
ACTN4-210ENST00000588618 TRIM32Q13049 653 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 POTEBQ6S5H4 581 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 CATSPER3Q86XQ3 398 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 OR6J1Q8NGC5 347 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 DHX58Q96C10 678 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 HSD17B14Q9BPX1 270 aa25.35■■□□□ 1.65
ACTN4-210ENST00000588618 P4HBP07237 508 aaKnown RBP25.34■■□□□ 1.65
ACTN4-210ENST00000588618 PLCG1P19174 1290 aa25.34■■□□□ 1.65
ACTN4-210ENST00000588618 HYIQ5T013 277 aa25.34■■□□□ 1.65
ACTN4-210ENST00000588618 KCNK18Q7Z418 384 aa25.34■■□□□ 1.65
ACTN4-210ENST00000588618 TPH2Q8IWU9 490 aa25.34■■□□□ 1.65
ACTN4-210ENST00000588618 TRPV1Q8NER1 839 aa25.34■■□□□ 1.65
ACTN4-210ENST00000588618 SEPT1Q8WYJ6 367 aa25.34■■□□□ 1.65
ACTN4-210ENST00000588618 POLR3CQ9BUI4 534 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms