RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 SREBF1P36956 1147 aa24.89■■□□□ 1.58
CIRBP-219ENST00000588411 HIC1Q14526 733 aa24.89■■□□□ 1.58
CIRBP-219ENST00000588411 GLG1Q92896 1179 aa24.89■■□□□ 1.58
CIRBP-219ENST00000588411 PGBD1Q96JS3 809 aa24.89■■□□□ 1.58
CIRBP-219ENST00000588411 SMARCAD1Q9H4L7 1026 aa24.89■■□□□ 1.58
CIRBP-219ENST00000588411 ERAP1Q9NZ08 941 aa24.89■■□□□ 1.58
CIRBP-219ENST00000588411 NRCAMQ92823 1304 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 ABHD14A-ACY1A0A1B0GW23 586 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 TREHO43280 583 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 GNA11P29992 359 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 CLK2P49760 499 aaKnown RBP24.88■■□□□ 1.57
CIRBP-219ENST00000588411 EVCP57679 992 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 CCDC148Q8NFR7 591 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 WNT8BQ93098 351 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 RNF26Q9BY78 433 aaPredicted RBP24.88■■□□□ 1.57
CIRBP-219ENST00000588411 TM6SF1Q9BZW5 370 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 ZMYND12Q9H0C1 365 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 SETD4Q9NVD3 440 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 SLC9A2Q9UBY0 812 aa24.88■■□□□ 1.57
CIRBP-219ENST00000588411 NFASCO94856 1347 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 TRIP12Q14669 1992 aaPredicted RBP24.87■■□□□ 1.57
CIRBP-219ENST00000588411 CENPBP07199 599 aaPredicted RBP24.87■■□□□ 1.57
CIRBP-219ENST00000588411 PDIA3P30101 505 aaKnown RBP24.87■■□□□ 1.57
CIRBP-219ENST00000588411 ARHGAP4P98171 946 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 IKBKEQ14164 716 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 GPNMBQ14956 572 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 JAKMIP3Q5VZ66 844 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 HERC6Q8IVU3 1022 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 REXO1Q8N1G1 1221 aaKnown RBP24.87■■□□□ 1.57
CIRBP-219ENST00000588411 BICD2Q8TD16 824 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 TNPO1Q92973 898 aaKnown RBP24.87■■□□□ 1.57
CIRBP-219ENST00000588411 SLC26A6Q9BXS9 759 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 PRDM12Q9H4Q4 367 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 AZI2Q9H6S1 392 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 TMEM260Q9NX78 707 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 TELO2Q9Y4R8 837 aa24.87■■□□□ 1.57
CIRBP-219ENST00000588411 GSTTP1A0A1W2PQM5 241 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 LGR5O75473 907 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 IFNAR1P17181 557 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 WDR5P61964 334 aaKnown RBP24.86■■□□□ 1.57
CIRBP-219ENST00000588411 PPFIA1Q13136 1202 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 TRAF7Q6Q0C0 670 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 NIPA1Q7RTP0 329 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.86■■□□□ 1.57
CIRBP-219ENST00000588411 TRIM22Q8IYM9 498 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 LMBR1Q8WVP7 490 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 PHKBQ93100 1093 aa24.86■■□□□ 1.57
CIRBP-219ENST00000588411 MEIS1O00470 390 aa24.85■■□□□ 1.57
CIRBP-219ENST00000588411 MYOGP15173 224 aa24.85■■□□□ 1.57
CIRBP-219ENST00000588411 CCT2P78371 535 aaKnown RBP24.85■■□□□ 1.57
CIRBP-219ENST00000588411 TAF2Q6P1X5 1199 aa24.85■■□□□ 1.57
CIRBP-219ENST00000588411 CYP2W1Q8TAV3 490 aa24.85■■□□□ 1.57
CIRBP-219ENST00000588411 AGO4Q9HCK5 861 aaKnown RBP24.85■■□□□ 1.57
CIRBP-219ENST00000588411 CDH23Q9H251 3354 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 CPLX1O14810 134 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 TLL1O43897 1013 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 CA3P07451 260 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 MARK3P27448 753 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 NTRK3Q16288 839 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 PKN1Q16512 942 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 CPLX2Q6PUV4 134 aaKnown RBP24.84■■□□□ 1.57
CIRBP-219ENST00000588411 ZBED2Q9BTP6 218 aa24.84■■□□□ 1.57
CIRBP-219ENST00000588411 DOCK5Q9H7D0 1870 aa24.83■■□□□ 1.57
CIRBP-219ENST00000588411 EIF5BO60841 1220 aaKnown RBP24.83■■□□□ 1.57
CIRBP-219ENST00000588411 ARP10275 920 aa24.83■■□□□ 1.57
CIRBP-219ENST00000588411 TOB2Q14106 344 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-219ENST00000588411 MBTPS1Q14703 1052 aa24.83■■□□□ 1.57
CIRBP-219ENST00000588411 RSPH3Q86UC2 560 aa24.83■■□□□ 1.57
CIRBP-219ENST00000588411 SEPT8Q92599 483 aa24.83■■□□□ 1.57
CIRBP-219ENST00000588411 ZNF274Q96GC6 653 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-219ENST00000588411 UPF3BQ9BZI7 483 aaKnown RBP24.83■■□□□ 1.57
CIRBP-219ENST00000588411 NCOA5Q9HCD5 579 aaKnown RBP24.83■■□□□ 1.57
CIRBP-219ENST00000588411 TET1Q8NFU7 2136 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 RPLP2P05387 115 aaKnown RBP24.82■■□□□ 1.56
CIRBP-219ENST00000588411 CYP3A4P08684 503 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 CTSHP09668 335 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 ACTR2P61160 394 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 ADAM17P78536 824 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 SETQ01105 290 aaPredicted RBP24.82■■□□□ 1.56
CIRBP-219ENST00000588411 GRIK4Q16099 956 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 PLA2G4DQ86XP0 818 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 SH3GLB2Q9NR46 395 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 PDRG1Q9NUG6 133 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 TUBE1Q9UJT0 475 aa24.82■■□□□ 1.56
CIRBP-219ENST00000588411 RRN3P2A6NIE6 340 aa24.81■■□□□ 1.56
CIRBP-219ENST00000588411 IGFBP4P22692 258 aa24.81■■□□□ 1.56
CIRBP-219ENST00000588411 SSRP1Q08945 709 aaKnown RBP24.81■■□□□ 1.56
CIRBP-219ENST00000588411 TCEAL9Q9UHQ7 104 aa24.81■■□□□ 1.56
CIRBP-219ENST00000588411 AMHP03971 560 aa24.8■■□□□ 1.56
CIRBP-219ENST00000588411 ITGB3BPQ13352 177 aaPredicted RBP24.8■■□□□ 1.56
CIRBP-219ENST00000588411 PLEKHG4Q58EX7 1191 aa24.8■■□□□ 1.56
CIRBP-219ENST00000588411 PLPPR4Q7Z2D5 763 aa24.8■■□□□ 1.56
CIRBP-219ENST00000588411 RPAINQ86UA6 219 aa24.8■■□□□ 1.56
CIRBP-219ENST00000588411 DBF4BQ8NFT6 615 aa24.8■■□□□ 1.56
CIRBP-219ENST00000588411 TRPC6Q9Y210 931 aa24.8■■□□□ 1.56
CIRBP-219ENST00000588411 GBF1Q92538 1859 aa24.79■■□□□ 1.56
CIRBP-219ENST00000588411 FAM86B1E9PN63 330 aa24.79■■□□□ 1.56
CIRBP-219ENST00000588411 DLL1O00548 723 aa24.79■■□□□ 1.56
CIRBP-219ENST00000588411 PPFIA3O75145 1194 aa24.79■■□□□ 1.56
CIRBP-219ENST00000588411 FAM86B2P0C5J1 330 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms