RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
DDX39A-206ENST00000587730 CALR3Q96L12 384 aaKnown RBP20.42■□□□□ 0.86
DDX39A-206ENST00000587730 PSTPIP2Q9H939 334 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 CDK5RAP2Q96SN8 1893 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 SRCAPQ6ZRS2 3230 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 FRMPD2Q68DX3 1309 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-206ENST00000587730 BUB1O43683 1085 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 EDIL3O43854 480 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 TLR2O60603 784 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 HEXIM1O94992 359 aaKnown RBP20.41■□□□□ 0.86
DDX39A-206ENST00000587730 PLA2G4BP0C869 781 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 ADRA2BP18089 450 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 CXCR5P32302 372 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 SLC7A5Q01650 507 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 CUL1Q13616 776 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 LRRC41Q15345 812 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 KIAA0753Q2KHM9 967 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 IQCKQ8N0W5 287 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 ERMNQ8TAM6 284 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 LMBR1Q8WVP7 490 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 INPP4AQ96PE3 977 aaPredicted RBP20.41■□□□□ 0.86
DDX39A-206ENST00000587730 NLRC4Q9NPP4 1024 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 EMILIN3Q9NT22 766 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 FBXL5Q9UKA1 691 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 PCDHA2Q9Y5H9 948 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 CYP3A7-CYP3A51PA0A087WV96 503 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 NCK2O43639 380 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 CYP3A7P24462 503 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 RAPGEF1Q13905 1077 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 TRAPPC3LQ5T215 181 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 KDM7AQ6ZMT4 941 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 TADA2BQ86TJ2 420 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 VPS36Q86VN1 386 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 ADGRF4Q8IZF3 695 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 BCAS4Q8TDM0 211 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 TBC1D5Q92609 795 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 NUDT12Q9BQG2 462 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 KCTD10Q9H3F6 313 aa20.41■□□□□ 0.86
DDX39A-206ENST00000587730 LY75O60449 1722 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 HMGB1P1B2RPK0 211 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-206ENST00000587730 TBX3O15119 743 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 HERC4Q5GLZ8 1057 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-206ENST00000587730 LRIG3Q6UXM1 1119 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 MICALCLQ6ZW33 695 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 GPBP1Q86WP2 473 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 FMNL3Q8IVF7 1028 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 ANKRD13CQ8N6S4 541 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 MBOAT7Q96N66 472 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 GANQ9H2C0 597 aa20.4■□□□□ 0.86
DDX39A-206ENST00000587730 METTL14Q9HCE5 456 aaKnown RBP20.4■□□□□ 0.86
DDX39A-206ENST00000587730 ATF5Q9Y2D1 282 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-206ENST00000587730 AP3B2Q13367 1082 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 ADAM9Q13443 819 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 RPS6KA1Q15418 735 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 ARFGAP2Q8N6H7 521 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 USP38Q8NB14 1042 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 ZIM3Q96PE6 472 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 EPB41L5Q9HCM4 733 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 SERPINB13Q9UIV8 391 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 INTUQ9ULD6 942 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 TRAF3IP3Q9Y228 551 aa20.39■□□□□ 0.86
DDX39A-206ENST00000587730 GRIN2DO15399 1336 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 ATAD5Q96QE3 1844 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 GFPT2O94808 682 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 KRT18P05783 430 aaKnown RBP20.39■□□□□ 0.85
DDX39A-206ENST00000587730 GUCY2DQ02846 1103 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 TEX2Q8IWB9 1127 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
DDX39A-206ENST00000587730 CCDC24Q8N4L8 307 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 TSEN2Q8NCE0 465 aaKnown RBP20.39■□□□□ 0.85
DDX39A-206ENST00000587730 ACTRT1Q8TDG2 376 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 SCFD1Q8WVM8 642 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 CCDC17Q96LX7 622 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 PSMB7Q99436 277 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.39■□□□□ 0.85
DDX39A-206ENST00000587730 KCNMB3Q9NPA1 279 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 GPCPD1Q9NPB8 672 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 TMEM59LQ9UK28 342 aa20.39■□□□□ 0.85
DDX39A-206ENST00000587730 FOCADQ5VW36 1801 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 A0A0A6YYK5 440 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-206ENST00000587730 GOLGA6L10A6NI86 522 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 CALUO43852 315 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-206ENST00000587730 FLOT1O75955 427 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 SSBP05455 408 aaKnown RBP eCLIP20.38■□□□□ 0.85
DDX39A-206ENST00000587730 MYBP10242 640 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 CYP11B2P19099 503 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 RPL13P26373 211 aaKnown RBP20.38■□□□□ 0.85
DDX39A-206ENST00000587730 KLRC1P26715 233 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 PRKCIP41743 596 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 CCT5P48643 541 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 DPP8Q6V1X1 898 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-206ENST00000587730 LRRC45Q96CN5 670 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 PAGR1Q9BTK6 254 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 ARMCX3Q9UH62 379 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-206ENST00000587730 KIAA1024Q9UPX6 916 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 DAGLAQ9Y4D2 1042 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 TAF1LQ8IZX4 1826 aa20.38■□□□□ 0.85
DDX39A-206ENST00000587730 CCDC188H7C350 402 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 SLC16A3O15427 465 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms