RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 USP35Q9P2H5 1018 aa6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 SPATA31A5Q5VU36 1347 aa6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 SPATA31A7Q8IWB4 1347 aa6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 ALS2Q96Q42 1657 aa6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 GPRASP1Q5JY77 1395 aa6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 NRAPQ86VF7 1730 aa6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.67□□□□□ -1.34
RPRD1A-205ENST00000587563 THBS2P35442 1172 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 KLF10Q13118 480 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 ICAM4Q14773 271 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 SMN1Q16637 294 aaKnown RBP6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 PTF1AQ7RTS3 328 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 DDX11Q96FC9 970 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 EHMT1Q9H9B1 1298 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 TCAF1Q9Y4C2 921 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 ARHGEF28Q8N1W1 1705 aaKnown RBP6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 CRYBG1Q9Y4K1 1723 aa6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 POLR3AO14802 1390 aaPredicted RBP6.66□□□□□ -1.34
RPRD1A-205ENST00000587563 NPEPPSL1A6NEC2 478 aa6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 TNFRSF10CO14798 259 aa6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 TLR3O15455 904 aaKnown RBP6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 EZH2Q15910 746 aaKnown RBP6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 EAPPQ56P03 285 aaPredicted RBP6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 NOL9Q5SY16 702 aaKnown RBP6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 TTLL6Q8N841 843 aa6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 KYQ8NBH2 561 aa6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 C11orf84Q9BUA3 381 aaPredicted RBP6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 BCAS3Q9H6U6 928 aa6.65□□□□□ -1.34
RPRD1A-205ENST00000587563 SPATA31A1Q5TZJ5 1347 aa6.65□□□□□ -1.35
RPRD1A-205ENST00000587563 CAMTA1Q9Y6Y1 1673 aa6.65□□□□□ -1.35
RPRD1A-205ENST00000587563 TNS1Q9HBL0 1735 aaKnown RBP6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 H0Y8X5 98 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 NME1P15531 152 aaKnown RBP6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 GARTP22102 1010 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 SELENOPP49908 381 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 DAB2P98082 770 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 MCTP2Q6DN12 878 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 TXNDC5Q8NBS9 432 aaKnown RBP6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 TRAIPQ9BWF2 469 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 CD248Q9HCU0 757 aa6.64□□□□□ -1.35
RPRD1A-205ENST00000587563 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 USP19O94966 1318 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 INHBEP58166 350 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 R3HDM1Q15032 1099 aaKnown RBP6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 PPIP5K1Q6PFW1 1433 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 CCDC144CPQ8IYA2 1237 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 SMARCC1Q92922 1105 aaPredicted RBP6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 GORASP1Q9BQQ3 440 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 CENPJQ9HC77 1338 aaPredicted RBP6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 RNF19AQ9NV58 838 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 PPP4R1LQ9P1A2 415 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 SUCOQ9UBS9 1254 aaKnown RBP6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 PARP2Q9UGN5 583 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 SF3B6Q9Y3B4 125 aaKnown RBP6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 TESMINQ9Y4I5 508 aa6.63□□□□□ -1.35
RPRD1A-205ENST00000587563 COL14A1Q05707 1796 aaKnown RBP6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 NWD2Q9ULI1 1742 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 TOPAZ1Q8N9V7 1692 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 THSD7AQ9UPZ6 1657 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 LRP5O75197 1615 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 NRKQ7Z2Y5 1582 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 SSH2Q76I76 1423 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 WDR33Q9C0J8 1336 aaKnown RBP6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 MUSKO15146 869 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 GCP02774 474 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 POU4F1Q01851 419 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 FHL2Q14192 279 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 PALM2Q8IXS6 379 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 REXO1Q8N1G1 1221 aaKnown RBP6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 DNERQ8NFT8 737 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 CAMKK2Q96RR4 588 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 RXFP1Q9HBX9 757 aa6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 SUPT16HQ9Y5B9 1047 aaKnown RBP6.62□□□□□ -1.35
RPRD1A-205ENST00000587563 PHRF1Q9P1Y6 1649 aaKnown RBP6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 EIF3AQ14152 1382 aaKnown RBP6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 LTBP3Q9NS15 1303 aa6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 CTSHP09668 335 aa6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 ANKRD39Q53RE8 183 aa6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 C9orf131Q5VYM1 1079 aa6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 ZNF585AQ6P3V2 769 aa6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 FCRL3Q96P31 734 aaPredicted RBP6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 KCNQ5Q9NR82 932 aa6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 ING1Q9UK53 422 aaPredicted RBP6.61□□□□□ -1.35
RPRD1A-205ENST00000587563 USP6P35125 1406 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 MEIS3P2A8K0S8 358 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 EVA1CP58658 441 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 ZNF575Q86XF7 245 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 ZNF341Q9BYN7 854 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 PDGFDQ9GZP0 370 aaPredicted RBP6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 KAT6BQ8WYB5 2073 aa6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 COL5A2P05997 1499 aaPredicted RBP6.6□□□□□ -1.35
RPRD1A-205ENST00000587563 CPDO75976 1380 aa6.59□□□□□ -1.35
RPRD1A-205ENST00000587563 LMO7Q8WWI1 1683 aa6.59□□□□□ -1.35
RPRD1A-205ENST00000587563 PATL2C9JE40 543 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms