RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 BARX2Q9UMQ3 279 aaPredicted RBP9.95□□□□□ -0.82
SDF2-204ENST00000587338 USP15Q9Y4E8 981 aaPredicted RBP9.95□□□□□ -0.82
SDF2-204ENST00000587338 KMT2EQ8IZD2 1858 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 NEDD4P46934 1319 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 IGHDP01880 384 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 GNAT1P11488 350 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 MX1P20591 662 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 DNAJB1P25685 340 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 HOXA13P31271 388 aaPredicted RBP9.94□□□□□ -0.82
SDF2-204ENST00000587338 NRIP1P48552 1158 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 HSD17B4P51659 736 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 CAMK1Q14012 370 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 PGM5Q15124 567 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 ASPRV1Q53RT3 343 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
SDF2-204ENST00000587338 RBM23Q86U06 439 aaKnown RBP9.94□□□□□ -0.82
SDF2-204ENST00000587338 TRIM50Q86XT4 487 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 EFHBQ8N7U6 833 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 ESR2Q92731 530 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 RPGRIP1Q96KN7 1286 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 IRF2BPLQ9H1B7 796 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 KAT14Q9H8E8 782 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 RC3H2Q9HBD1 1191 aaKnown RBP9.94□□□□□ -0.82
SDF2-204ENST00000587338 HELLSQ9NRZ9 838 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 CLEC1BQ9P126 229 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 PLAGL2Q9UPG8 496 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 DCHS1Q96JQ0 3298 aa9.94□□□□□ -0.82
SDF2-204ENST00000587338 A0A0D9SFI3 127 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 H0Y858 1186 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 OPLAHO14841 1288 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 KDM4AO75164 1064 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 CHRNA1P02708 482 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 PCP11498 1178 aaKnown RBP9.93□□□□□ -0.82
SDF2-204ENST00000587338 COASYQ13057 564 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 CBX2Q14781 532 aaPredicted RBP9.93□□□□□ -0.82
SDF2-204ENST00000587338 FAM26DQ5JW98 314 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 VSIG10LQ86VR7 867 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 LMBR1Q8WVP7 490 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 ASIC4Q96FT7 647 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 FAM227BQ96M60 508 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 PHF7Q9BWX1 381 aaPredicted RBP9.93□□□□□ -0.82
SDF2-204ENST00000587338 PLVAPQ9BX97 442 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 AMNQ9BXJ7 453 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 BCAS3Q9H6U6 928 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 JMJD4Q9H9V9 463 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 TLR9Q9NR96 1032 aa9.93□□□□□ -0.82
SDF2-204ENST00000587338 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
SDF2-204ENST00000587338 MRPL42Q9Y6G3 142 aaKnown RBP9.93□□□□□ -0.82
SDF2-204ENST00000587338 DMDP11532 3685 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 MYH6P13533 1939 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 DMXL1Q9Y485 3027 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 ZMYM6O95789 1325 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 GLP2RO95838 553 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 ITGB1P05556 798 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 PARP1P09874 1014 aaKnown RBP9.92□□□□□ -0.82
SDF2-204ENST00000587338 TGFB3P10600 412 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 CCND2P30279 289 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 AVPR2P30518 371 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 SP4Q02446 784 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 LPIN1Q14693 890 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 MCMDC2Q4G0Z9 681 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 PAN2Q504Q3 1202 aaKnown RBP9.92□□□□□ -0.82
SDF2-204ENST00000587338 UTP14CQ5TAP6 766 aaKnown RBP9.92□□□□□ -0.82
SDF2-204ENST00000587338 RUFY4Q6ZNE9 571 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 STOX1Q6ZVD7 989 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 ZBTB33Q86T24 672 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 ZNF589Q86UQ0 364 aaPredicted RBP9.92□□□□□ -0.82
SDF2-204ENST00000587338 FCHSD1Q86WN1 690 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 IQCA1Q86XH1 822 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 KLHL23Q8NBE8 558 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 P2RX5Q93086 422 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 ZNF689Q96CS4 500 aaPredicted RBP9.92□□□□□ -0.82
SDF2-204ENST00000587338 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
SDF2-204ENST00000587338 PCDHGC5Q9Y5F6 944 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 FRYLO94915 3013 aa9.92□□□□□ -0.82
SDF2-204ENST00000587338 ZNF292O60281 2723 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 ENPP3O14638 875 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 PPP1R11O60927 126 aaPredicted RBP9.91□□□□□ -0.82
SDF2-204ENST00000587338 DGKIO75912 1065 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 PDGFBP01127 241 aaPredicted RBP9.91□□□□□ -0.82
SDF2-204ENST00000587338 ICAM3P32942 547 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 GHRHRQ02643 423 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 PTPN21Q16825 1174 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 METTL7BQ6UX53 244 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 CYFIP1Q7L576 1253 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 ASCL5Q7RTU5 278 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
SDF2-204ENST00000587338 SPPL3Q8TCT6 385 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 POF1BQ8WVV4 589 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 GPR20Q99678 358 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
SDF2-204ENST00000587338 TTC3P53804 2025 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 NRCAMQ92823 1304 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 GCOM1H8Y6P7 765 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 PER2O15055 1255 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms