RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 CAND2O75155 1236 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
ZNF540-205ENST00000587220 CPA1P15085 419 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 KCNA2P16389 499 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
ZNF540-205ENST00000587220 RCAN1P53805 252 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 DEFB103AP81534 67 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 GPNMBQ14956 572 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
ZNF540-205ENST00000587220 TEX2Q8IWB9 1127 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 SEPT1Q8WYJ6 367 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
ZNF540-205ENST00000587220 SDF4Q9BRK5 362 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 ERAP1Q9NZ08 941 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 UBIAD1Q9Y5Z9 338 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 NRCAMQ92823 1304 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 STXBP3O00186 592 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 AMHP03971 560 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 MARK3P27448 753 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 HOXC8P31273 242 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 HSPA4P34932 840 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 ZNF76P36508 570 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
ZNF540-205ENST00000587220 TAP1Q03518 808 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
ZNF540-205ENST00000587220 FAM117BQ6P1L5 589 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 Q6ZUG5 572 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 SEPT8Q92599 483 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 BRF1Q92994 677 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 SMARCAD1Q9H4L7 1026 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 AZI2Q9H6S1 392 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
ZNF540-205ENST00000587220 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 THEGQ9P2T0 379 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 KAT6AQ92794 2004 aa12.18□□□□□ -0.46
ZNF540-205ENST00000587220 PTPRSQ13332 1948 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 REV3LO60673 3130 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 RFXAPO00287 272 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 GJB5O95377 273 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 PSMA5P28066 241 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 CDC27P30260 824 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
ZNF540-205ENST00000587220 FUT2Q10981 343 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 PPFIA1Q13136 1202 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 AP3B2Q13367 1082 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 TJAP1Q5JTD0 557 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 RSPH3Q86UC2 560 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 DBF4BQ8NFT6 615 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 CCDC12Q8WUD4 166 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-205ENST00000587220 ATXN2LQ8WWM7 1075 aaKnown RBP12.17□□□□□ -0.46
ZNF540-205ENST00000587220 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
ZNF540-205ENST00000587220 RAD9AQ99638 391 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 SLC9A2Q9UBY0 812 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
ZNF540-205ENST00000587220 GSTTP1A0A1W2PQM5 241 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 LCHNA4D1U4 455 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 SCG2P13521 617 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 GRIK4Q16099 956 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 PFKFB3Q16875 520 aaPredicted RBP12.16□□□□□ -0.46
ZNF540-205ENST00000587220 TCTN1Q2MV58 587 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 CEP55Q53EZ4 464 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 PLEKHG4Q58EX7 1191 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 TAF2Q6P1X5 1199 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 PRDM6Q9NQX0 595 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 TMEM260Q9NX78 707 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 TUBE1Q9UJT0 475 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 INSL6Q9Y581 213 aa12.16□□□□□ -0.46
ZNF540-205ENST00000587220 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 SREBF1P36956 1147 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 IGBP1P78318 339 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 JAKMIP3Q5VZ66 844 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZNF540-205ENST00000587220 REXO1Q8N1G1 1221 aaKnown RBP12.15□□□□□ -0.46
ZNF540-205ENST00000587220 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 APBB2Q92870 758 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 KCNB2Q92953 911 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
ZNF540-205ENST00000587220 AGO4Q9HCK5 861 aaKnown RBP12.15□□□□□ -0.46
ZNF540-205ENST00000587220 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
ZNF540-205ENST00000587220 XIRP2A4UGR9 3374 aa12.15□□□□□ -0.46
ZNF540-205ENST00000587220 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.47
ZNF540-205ENST00000587220 NFASCO94856 1347 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms