RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ATP2A2P16615 1042 aaKnown RBP20.19■□□□□ 0.82
TPM4-206ENST00000587201 ARHGAP4P98171 946 aa20.19■□□□□ 0.82
TPM4-206ENST00000587201 SERINC5Q86VE9 423 aa20.19■□□□□ 0.82
TPM4-206ENST00000587201 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
TPM4-206ENST00000587201 ZNF274Q96GC6 653 aaPredicted RBP20.19■□□□□ 0.82
TPM4-206ENST00000587201 SDF4Q9BRK5 362 aa20.19■□□□□ 0.82
TPM4-206ENST00000587201 JPH1Q9HDC5 661 aaPredicted RBP20.19■□□□□ 0.82
TPM4-206ENST00000587201 SETD4Q9NVD3 440 aa20.19■□□□□ 0.82
TPM4-206ENST00000587201 CPLX1O14810 134 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 ARP10275 920 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 HOXC8P31273 242 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 THPOP40225 353 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 RABGGTBP53611 331 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 STK3Q13188 491 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 GPNMBQ14956 572 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 GRIN2CQ14957 1233 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 MCTP2Q6DN12 878 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 REXO1Q8N1G1 1221 aaKnown RBP20.18■□□□□ 0.82
TPM4-206ENST00000587201 GLG1Q92896 1179 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 NKX2-4Q9H2Z4 354 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 SLC9A2Q9UBY0 812 aa20.18■□□□□ 0.82
TPM4-206ENST00000587201 NBNO60934 754 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 BAIAP3O94812 1187 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 CXCL10P02778 98 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
TPM4-206ENST00000587201 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 BICD2Q8TD16 824 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 SLC9A7Q96T83 725 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 SMARCAD1Q9H4L7 1026 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 AGO4Q9HCK5 861 aaKnown RBP20.17■□□□□ 0.82
TPM4-206ENST00000587201 VPS54Q9P1Q0 977 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 YBX2Q9Y2T7 364 aaKnown RBP20.17■□□□□ 0.82
TPM4-206ENST00000587201 NFASCO94856 1347 aa20.17■□□□□ 0.82
TPM4-206ENST00000587201 RSPH10B2B2RC85 870 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 MEIS1O00470 390 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 ADAMTS3O15072 1205 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 RSPH10BP0C881 870 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 FOSL2P15408 326 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 MARK3P27448 753 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 KCNJ6P48051 423 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 CNKSR3Q6P9H4 555 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 CPLX2Q6PUV4 134 aaKnown RBP20.16■□□□□ 0.82
TPM4-206ENST00000587201 TRAF7Q6Q0C0 670 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 NIPA1Q7RTP0 329 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 PLA2G4DQ86XP0 818 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 SLC28A3Q9HAS3 691 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 ERAP1Q9NZ08 941 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 NRCAMQ92823 1304 aa20.16■□□□□ 0.82
TPM4-206ENST00000587201 CYP3A4P08684 503 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 ITGB3BPQ13352 177 aaPredicted RBP20.15■□□□□ 0.82
TPM4-206ENST00000587201 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 RASGRP4Q8TDF6 673 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 LMBR1Q8WVP7 490 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 AZI2Q9H6S1 392 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 PCDHA11Q9Y5I1 949 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 CDH23Q9H251 3354 aa20.15■□□□□ 0.82
TPM4-206ENST00000587201 TET1Q8NFU7 2136 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 EMSYQ7Z589 1322 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 FAM86B1E9PN63 330 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 DDX39AO00148 427 aaKnown RBP20.14■□□□□ 0.81
TPM4-206ENST00000587201 DEXIO95424 95 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 FAM86B2P0C5J1 330 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 MYOGP15173 224 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 NLRP5P59047 1200 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 ANAPC15P60006 121 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 ACTR2P61160 394 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 PPFIA1Q13136 1202 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 MBTPS1Q14703 1052 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 CRYGNQ8WXF5 182 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 SH3GLB2Q9NR46 395 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 COL6A3P12111 3177 aa20.14■□□□□ 0.81
TPM4-206ENST00000587201 KIF28PB7ZC32 967 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 EIF5BO60841 1220 aaKnown RBP20.13■□□□□ 0.81
TPM4-206ENST00000587201 CAND2O75155 1236 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 LGR5O75473 907 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 CTSHP09668 335 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 WDR5P61964 334 aaKnown RBP20.13■□□□□ 0.81
TPM4-206ENST00000587201 ADAM17P78536 824 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 PPP2R2DQ66LE6 453 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 PCYT2Q99447 389 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 PRDM12Q9H4Q4 367 aa20.13■□□□□ 0.81
TPM4-206ENST00000587201 GBF1Q92538 1859 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 IGLV3-22A0A075B6J6 115 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
TPM4-206ENST00000587201 IKBKEQ14164 716 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 GRIK4Q16099 956 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 TCTN1Q2MV58 587 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 HERC6Q8IVU3 1022 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 MAFAQ8NHW3 353 aaPredicted RBP20.12■□□□□ 0.81
TPM4-206ENST00000587201 UIMC1Q96RL1 719 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 GAS2L1Q99501 681 aaPredicted RBP20.12■□□□□ 0.81
TPM4-206ENST00000587201 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
TPM4-206ENST00000587201 SLKQ9H2G2 1235 aaPredicted RBP20.12■□□□□ 0.81
TPM4-206ENST00000587201 ABHD14A-ACY1A0A1B0GW23 586 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 RBAK-RBAKDNI3L0D1 243 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 EFCAB14O75071 495 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 STAT5BP51692 787 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 IGBP1P78318 339 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 SCRN1Q12765 414 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms