RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.75■■□□□ 1.07
CLPTM1-206ENST00000586975 PHOSPHO2Q8TCD6 241 aa21.75■■□□□ 1.07
CLPTM1-206ENST00000586975 PPM1EQ8WY54 764 aa21.75■■□□□ 1.07
CLPTM1-206ENST00000586975 SLC26A6Q9BXS9 759 aa21.75■■□□□ 1.07
CLPTM1-206ENST00000586975 NCOA5Q9HCD5 579 aaKnown RBP21.75■■□□□ 1.07
CLPTM1-206ENST00000586975 CYP46A1Q9Y6A2 500 aa21.75■■□□□ 1.07
CLPTM1-206ENST00000586975 KIF28PB7ZC32 967 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 CXCL10P02778 98 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 CA3P07451 260 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 ARP10275 920 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 AP3B2Q13367 1082 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 CEP55Q53EZ4 464 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 TRAF7Q6Q0C0 670 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 TMCO2Q7Z6W1 182 aaPredicted RBP21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 HERC6Q8IVU3 1022 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 FBXL16Q8N461 479 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 CCDC12Q8WUD4 166 aaPredicted RBP21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 SDF4Q9BRK5 362 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 LARP6Q9BRS8 491 aaKnown RBP21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 AGXT2Q9BYV1 514 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 UPF3BQ9BZI7 483 aaKnown RBP21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 ZSWIM6Q9HCJ5 1215 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 C6orf50Q9HD87 102 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 JPH1Q9HDC5 661 aaPredicted RBP21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 TANC1Q9C0D5 1861 aa21.74■■□□□ 1.07
CLPTM1-206ENST00000586975 DOCK5Q9H7D0 1870 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 CHD9Q3L8U1 2897 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 DLL1O00548 723 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 PRPF3O43395 683 aaKnown RBP21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 PDIA3P30101 505 aaKnown RBP21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 HOXC8P31273 242 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 SREBF1P36956 1147 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 WDR5P61964 334 aaKnown RBP21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 IKBKEQ14164 716 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 MBTPS1Q14703 1052 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 TCTN1Q2MV58 587 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 ZBED2Q9BTP6 218 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 CERS4Q9HA82 394 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 ERAP1Q9NZ08 941 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 SLC9A2Q9UBY0 812 aa21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 TRIP12Q14669 1992 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-206ENST00000586975 EPB41L2O43491 1005 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 TLL1O43897 1013 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 LGR5O75473 907 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 CLK2P49760 499 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 DEFB103AP81534 67 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 PPFIA1Q13136 1202 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 PKN1Q16512 942 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 TEX2Q8IWB9 1127 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 LMBR1Q8WVP7 490 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 UIMC1Q96RL1 719 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 SMARCAD1Q9H4L7 1026 aa21.72■■□□□ 1.07
CLPTM1-206ENST00000586975 ABHD14A-ACY1A0A1B0GW23 586 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 DDX39AO00148 427 aaKnown RBP21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 IGBP1P78318 339 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 TOB2Q14106 344 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 FAM117BQ6P1L5 589 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 DBF4BQ8NFT6 615 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 ZMYND12Q9H0C1 365 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 AZI2Q9H6S1 392 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 AGO4Q9HCK5 861 aaKnown RBP21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 EMSYQ7Z589 1322 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 NRCAMQ92823 1304 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 UNC80Q8N2C7 3258 aa21.71■■□□□ 1.07
CLPTM1-206ENST00000586975 ADAMTS3O15072 1205 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 GNA11P29992 359 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 STK3Q13188 491 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 ADGRE1Q14246 886 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 CCDC85BQ15834 202 aaPredicted RBP21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 GRIK4Q16099 956 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 NTRK3Q16288 839 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 PLA2G4DQ86XP0 818 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 REXO1Q8N1G1 1221 aaKnown RBP21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 NID2Q14112 1375 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 TET1Q8NFU7 2136 aa21.7■■□□□ 1.06
CLPTM1-206ENST00000586975 ESYT2A0FGR8 921 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 MEIS1O00470 390 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 CPLX1O14810 134 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 IFNAR1P17181 557 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 ACTR2P61160 394 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 ITGB3BPQ13352 177 aaPredicted RBP21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 ERICH6BQ5W0A0 696 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 USP38Q8NB14 1042 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 RASGRP4Q8TDF6 673 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 RNF26Q9BY78 433 aaPredicted RBP21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 PDRG1Q9NUG6 133 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 VPS54Q9P1Q0 977 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 TRPC6Q9Y210 931 aa21.69■■□□□ 1.06
CLPTM1-206ENST00000586975 PRUNE2Q8WUY3 3088 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 FAM86B1E9PN63 330 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 RFXAPO00287 272 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 EFCAB14O75071 495 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 FAM86B2P0C5J1 330 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 EVCP57679 992 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 ADAM17P78536 824 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 SSRP1Q08945 709 aaKnown RBP21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 RUFY4Q6ZNE9 571 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 TRIM22Q8IYM9 498 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 MICALL1Q8N3F8 863 aa21.68■■□□□ 1.06
CLPTM1-206ENST00000586975 CCDC148Q8NFR7 591 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms