RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 A0A1W2PPC1 479 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 BECN2A8MW95 431 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 GOLGA6L19H0YKK7 550 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 CHMP2AO43633 222 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 MED24O75448 989 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 RPN1P04843 607 aaKnown RBP11.4□□□□□ -0.58
APOC1-201ENST00000586638 ARP10275 920 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 MYCLP12524 364 aaPredicted RBP11.4□□□□□ -0.58
APOC1-201ENST00000586638 HERVK_113P62684 666 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 PDIA5Q14554 519 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 CEP55Q53EZ4 464 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 LRCH2Q5VUJ6 765 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 SMYD4Q8IYR2 804 aaPredicted RBP11.4□□□□□ -0.58
APOC1-201ENST00000586638 LARP4BQ92615 738 aaKnown RBP11.4□□□□□ -0.58
APOC1-201ENST00000586638 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 PAWRQ96IZ0 340 aaKnown RBP11.4□□□□□ -0.58
APOC1-201ENST00000586638 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 PPP1R9BQ96SB3 815 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 BPIFA3Q9BQP9 254 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 KBTBD4Q9NVX7 518 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 LOXHD1Q8IVV2 1947 aa11.4□□□□□ -0.58
APOC1-201ENST00000586638 DDX39AO00148 427 aaKnown RBP11.39□□□□□ -0.59
APOC1-201ENST00000586638 EML1O00423 815 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 KLRC4O43908 158 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 ADCY5O95622 1261 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 ITGB5P18084 799 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 ASIC1P78348 528 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 MRPS9P82933 396 aaKnown RBP11.39□□□□□ -0.59
APOC1-201ENST00000586638 HYIQ5T013 277 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 ARHGEF16Q5VV41 709 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 PCNX4Q63HM2 1172 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 NECAB2Q7Z6G3 386 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 RIOX2Q8IUF8 465 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
APOC1-201ENST00000586638 ANKRD13CQ8N6S4 541 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 MB21D1Q8N884 522 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 PDLIM2Q96JY6 352 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 RMDN3Q96TC7 470 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 PDCD2LQ9BRP1 358 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 TEKT3Q9BXF9 490 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 PAK6Q9NQU5 681 aaPredicted RBP11.39□□□□□ -0.59
APOC1-201ENST00000586638 MAP3K20Q9NYL2 800 aaKnown RBP11.39□□□□□ -0.59
APOC1-201ENST00000586638 CYP39A1Q9NYL5 469 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 CTNND2Q9UQB3 1225 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
APOC1-201ENST00000586638 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 PLXNA1Q9UIW2 1896 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 MCM3APO60318 1980 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 E9PMD0 336 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 MEIS1O00470 390 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 GAS7O60861 476 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 PSMD10O75832 226 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
APOC1-201ENST00000586638 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.592e-8■■■■■ 46.6
APOC1-201ENST00000586638 NCAPHQ15003 741 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 KLHL10Q6JEL2 608 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 NIPA1Q7RTP0 329 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 NCAPG2Q86XI2 1143 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 ERMNQ8TAM6 284 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
APOC1-201ENST00000586638 TRIM9Q9C026 710 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 CRISPLD2Q9H0B8 497 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 UNC45AQ9H3U1 944 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
APOC1-201ENST00000586638 ZNFX1Q9P2E3 1918 aaKnown RBP11.38□□□□□ -0.59
APOC1-201ENST00000586638 ARID2Q68CP9 1835 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 MYMKA6NI61 221 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 SLC26A4O43511 780 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
APOC1-201ENST00000586638 CCND2P30279 289 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 MYL5Q02045 173 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 CYP4A11Q02928 519 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 PPP2R5CQ13362 524 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 MLKLQ8NB16 471 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 DYDC2Q96IM9 177 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 C7orf25Q9BPX7 421 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 EIF2AK1Q9BQI3 630 aaKnown RBP11.37□□□□□ -0.59
APOC1-201ENST00000586638 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.596e-8■□□□□ 9.9
APOC1-201ENST00000586638 NT5C3AQ9H0P0 336 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 AGO4Q9HCK5 861 aaKnown RBP11.37□□□□□ -0.59
APOC1-201ENST00000586638 JADE2Q9NQC1 790 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 EXOC1Q9NV70 894 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 RMND1Q9NWS8 449 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
APOC1-201ENST00000586638 PFASO15067 1338 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 SMTNL1A8MU46 457 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms