RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 REXO1Q8N1G1 1221 aaKnown RBP14.11□□□□□ -0.15
SS18-225ENST00000585121 SLC17A8Q8NDX2 589 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 PHOSPHO2Q8TCD6 241 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 TNPO1Q92973 898 aaKnown RBP14.11□□□□□ -0.15
SS18-225ENST00000585121 SMARCAD1Q9H4L7 1026 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 AZI2Q9H6S1 392 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 NCOA5Q9HCD5 579 aaKnown RBP14.11□□□□□ -0.15
SS18-225ENST00000585121 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 PBX2P40425 430 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 ANAPC15P60006 121 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 NTRK3Q16288 839 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 ZNF618Q5T7W0 954 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 CNKSR3Q6P9H4 555 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 NIPA1Q7RTP0 329 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 VWCEQ96DN2 955 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 SLC9A7Q96T83 725 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 SH3GLB2Q9NR46 395 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 SETD4Q9NVD3 440 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 ERAP1Q9NZ08 941 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 PCDHA11Q9Y5I1 949 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 NFASCO94856 1347 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 EMSYQ7Z589 1322 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 NRCAMQ92823 1304 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 RSPH10B2B2RC85 870 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 MEIS1O00470 390 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 TREHO43280 583 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 EFCAB14O75071 495 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 CAND2O75155 1236 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 CXCL10P02778 98 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 RSPH10BP0C881 870 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 FOSL2P15408 326 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 NLRP5P59047 1200 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 STK3Q13188 491 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 TRIM71Q2Q1W2 868 aaKnown RBP14.1□□□□□ -0.15
SS18-225ENST00000585121 PLA2G4DQ86XP0 818 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 CYP2W1Q8TAV3 490 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 MYLIPQ8WY64 445 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 NKX2-4Q9H2Z4 354 aa14.1□□□□□ -0.15
SS18-225ENST00000585121 AGO4Q9HCK5 861 aaKnown RBP14.1□□□□□ -0.15
SS18-225ENST00000585121 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 PPFIA3O75145 1194 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 CDKL5O76039 1030 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 DEXIO95424 95 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 CYP3A4P08684 503 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 ARP10275 920 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 MARK3P27448 753 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 HOXC8P31273 242 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
SS18-225ENST00000585121 PPFIA1Q13136 1202 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 IKBKEQ14164 716 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 HIC1Q14526 733 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 GRIN2CQ14957 1233 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 ANKRD1Q15327 319 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 GAS2L1Q99501 681 aaPredicted RBP14.09□□□□□ -0.15
SS18-225ENST00000585121 LARP6Q9BRS8 491 aaKnown RBP14.09□□□□□ -0.15
SS18-225ENST00000585121 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 TCEAL9Q9UHQ7 104 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 TELO2Q9Y4R8 837 aa14.09□□□□□ -0.15
SS18-225ENST00000585121 ABHD14A-ACY1A0A1B0GW23 586 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 RRN3P2A6NIE6 340 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 NBNO60934 754 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 RABGGTBP53611 331 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 ACTR2P61160 394 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 PPP2R2DQ66LE6 453 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 RSPH3Q86UC2 560 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 LMBR1Q8WVP7 490 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 WNT8BQ93098 351 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 C22orf23Q9BZE7 217 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 SLKQ9H2G2 1235 aaPredicted RBP14.08□□□□□ -0.16
SS18-225ENST00000585121 COL6A3P12111 3177 aa14.08□□□□□ -0.16
SS18-225ENST00000585121 LGR5O75473 907 aa14.07□□□□□ -0.16
SS18-225ENST00000585121 TAF2Q6P1X5 1199 aa14.07□□□□□ -0.16
SS18-225ENST00000585121 FAM177A1Q8N128 213 aaPredicted RBP14.07□□□□□ -0.16
SS18-225ENST00000585121 MAFAQ8NHW3 353 aaPredicted RBP14.07□□□□□ -0.16
SS18-225ENST00000585121 ZBED2Q9BTP6 218 aa14.07□□□□□ -0.16
SS18-225ENST00000585121 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
SS18-225ENST00000585121 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
SS18-225ENST00000585121 YBX2Q9Y2T7 364 aaKnown RBP14.07□□□□□ -0.16
SS18-225ENST00000585121 FAM86B1E9PN63 330 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 IPO5O00410 1097 aaKnown RBP14.06□□□□□ -0.16
SS18-225ENST00000585121 BACH1O14867 736 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 RPLP2P05387 115 aaKnown RBP14.06□□□□□ -0.16
SS18-225ENST00000585121 CTSHP09668 335 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 FAM86B2P0C5J1 330 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 XBP1P17861 261 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 SLC26A2P50443 739 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 STAT5BP51692 787 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 WDR5P61964 334 aaKnown RBP14.06□□□□□ -0.16
SS18-225ENST00000585121 ITGB3BPQ13352 177 aaPredicted RBP14.06□□□□□ -0.16
SS18-225ENST00000585121 GPNMBQ14956 572 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 GRIK4Q16099 956 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 FAM160B1Q5W0V3 765 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 TRAF7Q6Q0C0 670 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 HERC6Q8IVU3 1022 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 SEPT8Q92599 483 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms