RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ZNF215Q9UL58 517 aaPredicted RBP24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 TREHO43280 583 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 NBNO60934 754 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 ARP10275 920 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 IFNAR1P17181 557 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 CEP55Q53EZ4 464 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 SLC17A8Q8NDX2 589 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 SEPT1Q8WYJ6 367 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 RNF26Q9BY78 433 aaPredicted RBP24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 NKX2-4Q9H2Z4 354 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 A0A0C4DFX4 3053 aa24.5■■□□□ 1.51
PPP4R1-228ENST00000584074 ESYT2A0FGR8 921 aa24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 MYOGP15173 224 aa24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 THPOP40225 353 aa24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 ARHGAP4P98171 946 aa24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 MBTPS1Q14703 1052 aa24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 CCDC12Q8WUD4 166 aaPredicted RBP24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 C6orf50Q9HD87 102 aa24.49■■□□□ 1.51
PPP4R1-228ENST00000584074 MEIS1O00470 390 aa24.48■■□□□ 1.51
PPP4R1-228ENST00000584074 PARNO95453 639 aaKnown RBP24.48■■□□□ 1.51
PPP4R1-228ENST00000584074 CXCL10P02778 98 aa24.48■■□□□ 1.51
PPP4R1-228ENST00000584074 AGO4Q9HCK5 861 aaKnown RBP24.48■■□□□ 1.51
PPP4R1-228ENST00000584074 JPH1Q9HDC5 661 aaPredicted RBP24.48■■□□□ 1.51
PPP4R1-228ENST00000584074 PDRG1Q9NUG6 133 aa24.48■■□□□ 1.51
PPP4R1-228ENST00000584074 GNAT1P11488 350 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 FOSL2P15408 326 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 MARK3P27448 753 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 ZNF76P36508 570 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 ITGB3BPQ13352 177 aaPredicted RBP24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 TCTN1Q2MV58 587 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 REXO1Q8N1G1 1221 aaKnown RBP24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 LMBR1Q8WVP7 490 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 CRYGNQ8WXF5 182 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 GLG1Q92896 1179 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 ZNF274Q96GC6 653 aaPredicted RBP24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 SLC9A2Q9UBY0 812 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 PCDHA11Q9Y5I1 949 aa24.47■■□□□ 1.51
PPP4R1-228ENST00000584074 UNC80Q8N2C7 3258 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 CHD7Q9P2D1 2997 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 FAM86B1E9PN63 330 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 BAIAP3O94812 1187 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 FAM86B2P0C5J1 330 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 ADAM17P78536 824 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 STK3Q13188 491 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 SDF4Q9BRK5 362 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 SLC28A3Q9HAS3 691 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 VPS54Q9P1Q0 977 aa24.46■■□□□ 1.51
PPP4R1-228ENST00000584074 TRIP12Q14669 1992 aaPredicted RBP24.45■■□□□ 1.51
PPP4R1-228ENST00000584074 NFASCO94856 1347 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 RSPH10B2B2RC85 870 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 RSPH10BP0C881 870 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 GNA11P29992 359 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 CNKSR3Q6P9H4 555 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 MAFAQ8NHW3 353 aaPredicted RBP24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 PHOSPHO2Q8TCD6 241 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 RASGRP4Q8TDF6 673 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 SLC9A7Q96T83 725 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 PCYT2Q99447 389 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 SMARCAD1Q9H4L7 1026 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 ERAP1Q9NZ08 941 aa24.45■■□□□ 1.5
PPP4R1-228ENST00000584074 NRCAMQ92823 1304 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 CYP3A4P08684 503 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 ACTR2P61160 394 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 WDR5P61964 334 aaKnown RBP24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 MCTP2Q6DN12 878 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 NIPA1Q7RTP0 329 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 HERC6Q8IVU3 1022 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 UIMC1Q96RL1 719 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 PRDM12Q9H4Q4 367 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 PRUNE2Q8WUY3 3088 aa24.44■■□□□ 1.5
PPP4R1-228ENST00000584074 TET1Q8NFU7 2136 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 IGLV3-22A0A075B6J6 115 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 CPLX1O14810 134 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 LGR5O75473 907 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 CTSHP09668 335 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 KCNJ6P48051 423 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 SSRP1Q08945 709 aaKnown RBP24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 PPFIA1Q13136 1202 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 PPP2R2DQ66LE6 453 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 PLA2G4DQ86XP0 818 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 TRIM22Q8IYM9 498 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 CCDC148Q8NFR7 591 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 BICD2Q8TD16 824 aa24.43■■□□□ 1.5
PPP4R1-228ENST00000584074 EMSYQ7Z589 1322 aa24.42■■□□□ 1.5
PPP4R1-228ENST00000584074 TMCO2Q7Z6W1 182 aaPredicted RBP24.42■■□□□ 1.5
PPP4R1-228ENST00000584074 OSBPL7Q9BZF2 842 aa24.42■■□□□ 1.5
PPP4R1-228ENST00000584074 ABHD14A-ACY1A0A1B0GW23 586 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 DDX39AO00148 427 aaKnown RBP24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 CCNE2O96020 404 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 CA3P07451 260 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 DEFB103AP81534 67 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 IKBKEQ14164 716 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 GRIK4Q16099 956 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 RUFY4Q6ZNE9 571 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 DBF4BQ8NFT6 615 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 AZI2Q9H6S1 392 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 SH3GLB2Q9NR46 395 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 GBF1Q92538 1859 aa24.41■■□□□ 1.5
PPP4R1-228ENST00000584074 IPO5O00410 1097 aaKnown RBP24.4■■□□□ 1.5
PPP4R1-228ENST00000584074 CAND2O75155 1236 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms