RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SPATA33Q96N06 139 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 AP5M1Q9H0R1 490 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 UPF3AQ9H1J1 476 aaKnown RBP13.12□□□□□ -0.31
CDRT1-207ENST00000583965 UNC45AQ9H3U1 944 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 LRWD1Q9UFC0 647 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
CDRT1-207ENST00000583965 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 MYH11P35749 1972 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 DNAH12Q6ZR08 3092 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 POTEMA6NI47 508 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 ATG7O95352 703 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 CCNE2O96020 404 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 CPT1AP50416 773 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 GJA9P57773 515 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 ACTR2P61160 394 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 EPHA7Q15375 998 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 NCAPH2Q6IBW4 605 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 PAK6Q9NQU5 681 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 EVPLQ92817 2033 aa13.11□□□□□ -0.31
CDRT1-207ENST00000583965 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-207ENST00000583965 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 A6NJR5 290 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 CHMP2AO43633 222 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 PSAPP07602 524 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 HOXD8P13378 290 aaPredicted RBP13.1□□□□□ -0.31
CDRT1-207ENST00000583965 CCL5P13501 91 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 MUTP22033 750 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 TXLNAP40222 546 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 HSDL1Q3SXM5 330 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 HAUS3Q68CZ6 603 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 CLIC6Q96NY7 704 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 GPR20Q99678 358 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 CCSER1Q9C0I3 900 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 CSRNP2Q9H175 543 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
CDRT1-207ENST00000583965 IGKV6D-21A0A0A0MT36 114 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 A0A1W2PQ27 194 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 A0A1W2PQ64 194 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 EML1O00423 815 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 ZEB2O60315 1214 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 SORBS3O60504 671 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 KPNA6O60684 536 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 DKC1O60832 514 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 PPFIA4O75335 1185 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 P4HBP07237 508 aaKnown RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 MMP3P08254 477 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 CAPN2P17655 700 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 CMA1P23946 247 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 RPA1P27694 616 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 TCF7P36402 384 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 UBA7P41226 1012 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 SP4Q02446 784 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 GRIN1Q05586 938 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 DGKDQ16760 1214 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 LHX8Q68G74 356 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 EIF2AK1Q9BQI3 630 aaKnown RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-207ENST00000583965 RNF208Q9H0X6 261 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 TUFT1Q9NNX1 390 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 EMSYQ7Z589 1322 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 KDM3AQ9Y4C1 1321 aa13.09□□□□□ -0.31
CDRT1-207ENST00000583965 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 ADAMTS4O75173 837 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 LGR5O75473 907 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
CDRT1-207ENST00000583965 MTFR1Q15390 333 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 HYIQ5T013 277 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms