RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 GSTA4O15217 222 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 SMARCA5O60264 1052 aaPredicted RBP5.43□□□□□ -1.54
VAPA-206ENST00000583475 SASH1O94885 1247 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 RAPGEF3O95398 923 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 KCNC1P48547 511 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 BRAPQ7Z569 592 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 FEZF2Q8TBJ5 459 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 TMEM260Q9NX78 707 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 NTMQ9P121 344 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 SFMBT1Q9UHJ3 866 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 SRPK3Q9UPE1 567 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 CCDC66A2RUB6 948 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 FAM90A27PA6NNH2 459 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 PPP1R12AO14974 1030 aaPredicted RBP5.42□□□□□ -1.54
VAPA-206ENST00000583475 DNM2P50570 870 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 ST5P78524 1137 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 CRY1Q16526 586 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 FNDC3BQ53EP0 1204 aaKnown RBP5.42□□□□□ -1.54
VAPA-206ENST00000583475 FAM47CQ5HY64 1035 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 ABHD17CQ6PCB6 329 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 PTRH1Q86Y79 214 aaKnown RBP5.42□□□□□ -1.54
VAPA-206ENST00000583475 SP8Q8IXZ3 490 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 ZDHHC14Q8IZN3 488 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 NLGN4XQ8N0W4 816 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 SMURF1Q9HCE7 757 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 RAPGEFL1Q9UHV5 662 aa5.42□□□□□ -1.54
VAPA-206ENST00000583475 ESYT3A0FGR9 886 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 NOBOXO60393 691 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 KRT15P19012 456 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 IL13P35225 146 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 BTBD8Q5XKL5 378 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 OVCH1Q7RTY7 1134 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 ZNF761Q86XN6 746 aaPredicted RBP5.41□□□□□ -1.54
VAPA-206ENST00000583475 TMEM209Q96SK2 561 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 COQ6Q9Y2Z9 468 aa5.41□□□□□ -1.54
VAPA-206ENST00000583475 A0A0G2JLL6 359 aaPredicted RBP5.4□□□□□ -1.54
VAPA-206ENST00000583475 DDX3XO00571 662 aaKnown RBP eCLIP5.4□□□□□ -1.54
VAPA-206ENST00000583475 KCNK3O14649 394 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 ASMTLO95671 621 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 PTPN1P18031 435 aaKnown RBP5.4□□□□□ -1.54
VAPA-206ENST00000583475 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
VAPA-206ENST00000583475 PFKPQ01813 784 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 SEC23AQ15436 765 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 CD276Q5ZPR3 534 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 HHIPL2Q6UWX4 724 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 ADAMTS17Q8TE56 1095 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 ZSWIM3Q96MP5 696 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 CLIC6Q96NY7 704 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 CELF4Q9BZC1 486 aaKnown RBP5.4□□□□□ -1.54
VAPA-206ENST00000583475 CROTQ9UKG9 612 aa5.4□□□□□ -1.54
VAPA-206ENST00000583475 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.39□□□□□ -1.55
VAPA-206ENST00000583475 CLASP2O75122 1294 aaKnown RBP5.39□□□□□ -1.55
VAPA-206ENST00000583475 NPTXRO95502 500 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 ENO2P09104 434 aaPredicted RBP5.39□□□□□ -1.55
VAPA-206ENST00000583475 ZNF28P17035 718 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 DBPQ10586 325 aaPredicted RBP5.39□□□□□ -1.55
VAPA-206ENST00000583475 FIGNQ5HY92 759 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 PHF19Q5T6S3 580 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 NT5DC1Q5TFE4 455 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 MCTP2Q6DN12 878 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 VASNQ6EMK4 673 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 IGSF22Q8N9C0 903 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 RIC8BQ9NVN3 520 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
VAPA-206ENST00000583475 ZNF839A8K0R7 811 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 RFPL3O75679 317 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 DNAJC8O75937 253 aaPredicted RBP5.38□□□□□ -1.55
VAPA-206ENST00000583475 C4BPAP04003 597 aaKnown RBP5.38□□□□□ -1.55
VAPA-206ENST00000583475 APPP05067 770 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 SDSP20132 328 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 SKIDA1Q1XH10 827 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 LILRA6Q6PI73 481 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 FRMD5Q7Z6J6 570 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 CISD2Q8N5K1 135 aaKnown RBP5.38□□□□□ -1.55
VAPA-206ENST00000583475 TXNDC5Q8NBS9 432 aaKnown RBP5.38□□□□□ -1.55
VAPA-206ENST00000583475 ZCCHC14Q8WYQ9 949 aaKnown RBP5.38□□□□□ -1.55
VAPA-206ENST00000583475 DLL4Q9NR61 685 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 USP35Q9P2H5 1018 aa5.38□□□□□ -1.55
VAPA-206ENST00000583475 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 IL18BPO95998 194 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 ASLP04424 464 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 COL6A1P12109 1028 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 GJA4P35212 333 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 MECP2P51608 486 aaKnown RBP5.37□□□□□ -1.55
VAPA-206ENST00000583475 CTSWP56202 376 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 PABPC4Q13310 644 aaKnown RBP eCLIP5.37□□□□□ -1.55
VAPA-206ENST00000583475 RGL3Q3MIN7 710 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 TMEM177Q53S58 311 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 FAM26FQ5R3K3 315 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 PRAMEF18Q5VWM3 479 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 FSTL4Q6MZW2 842 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 EP400NLQ6ZTU2 488 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 JAZF1Q86VZ6 243 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 NOSTRINQ8IVI9 506 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 SYNPOQ8N3V7 929 aa5.37□□□□□ -1.55
VAPA-206ENST00000583475 IGDCC4Q8TDY8 1250 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms