RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ATG7O95352 703 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 ARIH2O95376 493 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
CCDC57-216ENST00000582885 CDC25AP30304 524 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 E2F4Q16254 413 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 CCL14Q16627 93 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 METTL7BQ6UX53 244 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 EMID1Q96A84 441 aaPredicted RBP13.48□□□□□ -0.25
CCDC57-216ENST00000582885 EIF2AK1Q9BQI3 630 aaKnown RBP13.48□□□□□ -0.25
CCDC57-216ENST00000582885 PDGFCQ9NRA1 345 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 DISC1Q9NRI5 854 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 A0A087X0B3 334 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 FARP2O94887 1054 aaPredicted RBP13.47□□□□□ -0.25
CCDC57-216ENST00000582885 GGPS1O95749 300 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 CCNE2O96020 404 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 SLFN14P0C7P3 912 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
CCDC57-216ENST00000582885 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
CCDC57-216ENST00000582885 GRB10Q13322 594 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 KARSQ15046 597 aaKnown RBP13.47□□□□□ -0.25
CCDC57-216ENST00000582885 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 TMEM119Q4V9L6 283 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 CELF3Q5SZQ8 465 aaKnown RBP13.47□□□□□ -0.25
CCDC57-216ENST00000582885 RRAGBQ5VZM2 374 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 MFSD14CQ5VZR4 134 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 TRIB2Q92519 343 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 CCDC34Q96HJ3 373 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 MAGEF1Q9HAY2 307 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
CCDC57-216ENST00000582885 DDX39AO00148 427 aaKnown RBP13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CTAGE5O15320 804 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CHMP2AO43633 222 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 ACTN4O43707 911 aaKnown RBP13.46□□□□□ -0.25
CCDC57-216ENST00000582885 DKC1O60832 514 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC57-216ENST00000582885 MED24O75448 989 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 SLITRK3O94933 977 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 LYPLA2O95372 231 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 GH1P01241 217 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 P4HBP07237 508 aaKnown RBP13.46□□□□□ -0.25
CCDC57-216ENST00000582885 PSAPP07602 524 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 PLCG1P19174 1290 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CYP2C19P33261 490 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 STAT6P42226 847 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 ACTR2P61160 394 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 ARHGAP1Q07960 439 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 LAMC2Q13753 1193 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 LY6KQ17RY6 165 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 LONRF3Q496Y0 759 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CATSPER3Q86XQ3 398 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 DHX37Q8IY37 1157 aaKnown RBP13.46□□□□□ -0.25
CCDC57-216ENST00000582885 PDILTQ8N807 584 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CDK5RAP3Q96JB5 506 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 CLSTN2Q9H4D0 955 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 BCAS3Q9H6U6 928 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 MLXIPQ9HAP2 919 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 ZHX1Q9UKY1 873 aaPredicted RBP13.46□□□□□ -0.25
CCDC57-216ENST00000582885 Q9Y3F1 56 aa13.46□□□□□ -0.25
CCDC57-216ENST00000582885 IGKV6D-21A0A0A0MT36 114 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 ADCY3O60266 1144 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 SUPT20HL2P0C7V6 817 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC57-216ENST00000582885 CYBAP13498 195 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 QARSP47897 775 aaKnown RBP13.45□□□□□ -0.26
CCDC57-216ENST00000582885 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 NAALADL2Q58DX5 795 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 CAVIN1Q6NZI2 390 aaKnown RBP13.45□□□□□ -0.26
CCDC57-216ENST00000582885 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 CEP57L1Q8IYX8 460 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 CNNM3Q8NE01 707 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 SEPT1Q8WYJ6 367 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 DHX58Q96C10 678 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 ANP32EQ9BTT0 268 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 PANK2Q9BZ23 570 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 NUP62CLQ9H1M0 184 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 TMEM63CQ9P1W3 806 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 SERTAD1Q9UHV2 236 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 HOOK1Q9UJC3 728 aaKnown RBP13.45□□□□□ -0.26
CCDC57-216ENST00000582885 FAM184BQ9ULE4 1060 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 PCNTO95613 3336 aa13.45□□□□□ -0.26
CCDC57-216ENST00000582885 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
CCDC57-216ENST00000582885 LETM1O95202 739 aaPredicted RBP13.44□□□□□ -0.26
CCDC57-216ENST00000582885 HMGCRP04035 888 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms