RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
ERBB2-213ENST00000582818 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
ERBB2-213ENST00000582818 SPZ1Q9BXG8 430 aa16.12■□□□□ 0.17
ERBB2-213ENST00000582818 C22orf23Q9BZE7 217 aa16.12■□□□□ 0.17
ERBB2-213ENST00000582818 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
ERBB2-213ENST00000582818 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
ERBB2-213ENST00000582818 ZNF215Q9UL58 517 aaPredicted RBP16.12■□□□□ 0.17
ERBB2-213ENST00000582818 LGALS2P05162 132 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 SMIM10L2AP0DMW4 78 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 SMIM10L2BP0DMW5 78 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 THPOP40225 353 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
ERBB2-213ENST00000582818 SLC35G1Q2M3R5 365 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 PCNX4Q63HM2 1172 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 RPAINQ86UA6 219 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 FCHSD1Q86WN1 690 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 TEX2Q8IWB9 1127 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 SEPT8Q92599 483 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 APBB2Q92870 758 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 BRF1Q92994 677 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 WNT8BQ93098 351 aa16.11■□□□□ 0.17
ERBB2-213ENST00000582818 ZNF274Q96GC6 653 aaPredicted RBP16.11■□□□□ 0.17
ERBB2-213ENST00000582818 PIEZO1Q92508 2521 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 RALGAPA2Q2PPJ7 1873 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 DOCK5Q9H7D0 1870 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 MYO7AQ13402 2215 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.1■□□□□ 0.17
ERBB2-213ENST00000582818 KLF18A0A0U1RQI7 1052 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 RPLP2P05387 115 aaKnown RBP16.1■□□□□ 0.17
ERBB2-213ENST00000582818 MRPS9P82933 396 aaKnown RBP16.1■□□□□ 0.17
ERBB2-213ENST00000582818 ZNF200P98182 395 aaPredicted RBP16.1■□□□□ 0.17
ERBB2-213ENST00000582818 HIC1Q14526 733 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 TCTN1Q2MV58 587 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 KRT40Q6A162 431 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 DBF4BQ8NFT6 615 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 CUL5Q93034 780 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 TCEANC2Q96MN5 208 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 RNPEPQ9H4A4 650 aa16.1■□□□□ 0.17
ERBB2-213ENST00000582818 CPA1P15085 419 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 ADAM17P78536 824 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 COL9A3Q14050 684 aaPredicted RBP16.09■□□□□ 0.17
ERBB2-213ENST00000582818 RTN1Q16799 776 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 PTPROQ16827 1216 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 FAM26DQ5JW98 314 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 FAM43BQ6ZT52 329 aaPredicted RBP16.09■□□□□ 0.17
ERBB2-213ENST00000582818 NLRX1Q86UT6 975 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 MICU3Q86XE3 530 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 FBXO22Q8NEZ5 403 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 GDPD5Q8WTR4 605 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
ERBB2-213ENST00000582818 GPR20Q99678 358 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 BACH2Q9BYV9 841 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
ERBB2-213ENST00000582818 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 NRCAMQ92823 1304 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 NLRC5Q86WI3 1866 aa16.09■□□□□ 0.17
ERBB2-213ENST00000582818 TTC3P53804 2025 aa16.08■□□□□ 0.16
ERBB2-213ENST00000582818 TREHO43280 583 aa16.08■□□□□ 0.16
ERBB2-213ENST00000582818 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERBB2-213ENST00000582818 NEK4P51957 841 aa16.08■□□□□ 0.16
ERBB2-213ENST00000582818 PUS10Q3MIT2 529 aaKnown RBP16.08■□□□□ 0.16
ERBB2-213ENST00000582818 LEXMQ3ZCV2 418 aa16.08■□□□□ 0.16
ERBB2-213ENST00000582818 MRPL38Q96DV4 380 aaKnown RBP16.08■□□□□ 0.16
ERBB2-213ENST00000582818 NECAB3Q96P71 396 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-213ENST00000582818 MYL10Q9BUA6 226 aa16.08■□□□□ 0.16
ERBB2-213ENST00000582818 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
ERBB2-213ENST00000582818 GOLGA8AA7E2F4 631 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 GOLGA8BA8MQT2 603 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 MAFGO15525 162 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 APOBRQ0VD83 1088 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-213ENST00000582818 TAF2Q6P1X5 1199 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
ERBB2-213ENST00000582818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.07■□□□□ 0.163e-7■■□□□ 11.5
ERBB2-213ENST00000582818 TMTC3Q6ZXV5 915 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 CYFIP1Q7L576 1253 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 SPRED2Q7Z698 418 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 TMCO2Q7Z6W1 182 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-213ENST00000582818 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.16
ERBB2-213ENST00000582818 GPRASP2Q96D09 838 aa16.07■□□□□ 0.16
ERBB2-213ENST00000582818 UBE2ZQ9H832 354 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-213ENST00000582818 NAP1L2Q9ULW6 460 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-213ENST00000582818 MEIS2O14770 477 aa16.06■□□□□ 0.16
ERBB2-213ENST00000582818 NCK2O43639 380 aa16.06■□□□□ 0.16
ERBB2-213ENST00000582818 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
ERBB2-213ENST00000582818 TIGD5Q53EQ6 642 aa16.06■□□□□ 0.16
ERBB2-213ENST00000582818 SRBD1Q8N5C6 995 aaKnown RBP16.06■□□□□ 0.16
ERBB2-213ENST00000582818 RWDD3Q9Y3V2 267 aa16.06■□□□□ 0.16
ERBB2-213ENST00000582818 H3BNC9 293 aa16.05■□□□□ 0.16
ERBB2-213ENST00000582818 GPR37L1O60883 481 aa16.05■□□□□ 0.16
ERBB2-213ENST00000582818 PLA2G5P39877 138 aa16.05■□□□□ 0.16
ERBB2-213ENST00000582818 RABEP1Q15276 862 aa16.05■□□□□ 0.16
ERBB2-213ENST00000582818 EPC2Q52LR7 807 aa16.05■□□□□ 0.16
ERBB2-213ENST00000582818 RSPH3Q86UC2 560 aa16.05■□□□□ 0.16
ERBB2-213ENST00000582818 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms