RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GH2	P01242	217 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	ZEB1	P37275	1124 aa	Predicted RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	BTD	P43251	543 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	MTAP	Q13126	283 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	BTG3	Q14201	252 aa	Predicted RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	ZNF618	Q5T7W0	954 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	NOL8	Q76FK4	1167 aa	Known RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	CMTR2	Q8IYT2	770 aa	Known RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	VGLL2	Q8N8G2	317 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	REPS2	Q8NFH8	660 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	APBB2	Q92870	758 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	FCRL3	Q96P31	734 aa	Predicted RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	LTB4R2	Q9NPC1	389 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	AAAS	Q9NRG9	546 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	EPS15L1	Q9UBC2	864 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	KNSTRN	Q9Y448	316 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	MTF2	Q9Y483	593 aa	Predicted RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	MRPL42	Q9Y6G3	142 aa	Known RBP	6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	HIVEP3	Q5T1R4	2406 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	NUP205	Q92621	2012 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	LCT	P09848	1927 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	WDR81	Q562E7	1941 aa		6.21	□□□□□ -1.42
MSI2-216	ENST00000582772	SHISA7	A6NL88	538 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	UPK3BL1	B0FP48	263 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	UPK3BL2	E5RIL1	263 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	DGKI	O75912	1065 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	PAPSS2	O95340	614 aa	Predicted RBP	6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	PTGS1	P23219	599 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	STAT3	P40763	770 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	IL12RB1	P42701	662 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	FOXO4	P98177	505 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	PTK7	Q13308	1070 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	FZD5	Q13467	585 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	NEUROD1	Q13562	356 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	PTPN14	Q15678	1187 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	KRT24	Q2M2I5	525 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	DUSP28	Q4G0W2	176 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	ZBTB41	Q5SVQ8	909 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	GDF6	Q6KF10	455 aa	Predicted RBP	6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	TAPT1	Q6NXT6	567 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	PDXDC2P	Q6P474	469 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	CHCHD4	Q8N4Q1	142 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	DEFB124	Q8NES8	71 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	ACER1	Q8TDN7	264 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	SEPT8	Q92599	483 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	NELL2	Q99435	816 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	PHAX	Q9H814	394 aa	Known RBP	6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	DZANK1	Q9NVP4	752 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	LZTS1	Q9Y250	596 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	LAMA4	Q16363	1823 aa		6.2	□□□□□ -1.42
MSI2-216	ENST00000582772	MED13L	Q71F56	2210 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	ATR	Q13535	2644 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	EML5	Q05BV3	1969 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	LNP1	A1A4G5	178 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	FAM170B	A6NMN3	283 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	NCAM2	O15394	837 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	FLOT1	O75955	427 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	CFB	P00751	764 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	TNFRSF8	P28908	595 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	MPL	P40238	635 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	ERVFC1	P60507	584 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	CWF19L2	Q2TBE0	894 aa	Known RBP	6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	LLGL2	Q6P1M3	1020 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	GPR155	Q7Z3F1	870 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	LONP2	Q86WA8	852 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	PIP4K2C	Q8TBX8	421 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	RSAD2	Q8WXG1	361 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	DDX11	Q96FC9	970 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	SEMA4C	Q9C0C4	833 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	CHRD	Q9H2X0	955 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	SLC32A1	Q9H598	525 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	GPHN	Q9NQX3	736 aa	Predicted RBP	6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	GTF2IRD1	Q9UHL9	959 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	DNMT3L	Q9UJW3	386 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	MAP3K2	Q9Y2U5	619 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	MYH1	P12882	1939 aa		6.19	□□□□□ -1.42
MSI2-216	ENST00000582772	ZMYM2	Q9UBW7	1377 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772		A6NJR5	290 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	C2CD2L	O14523	706 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	N4BP1	O75113	896 aa	Known RBP	6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	MYL3	P08590	195 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	WEE2	P0C1S8	567 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	NDUFV2	P19404	249 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	ADSS	P30520	456 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	CCR3	P51677	355 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	SIM1	P81133	766 aa	Predicted RBP	6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	UBXN2B	Q14CS0	331 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	MLF2	Q15773	248 aa	Predicted RBP	6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	CCDC57	Q2TAC2	916 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	PIP4P1	Q86T03	277 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	FMNL3	Q8IVF7	1028 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	MICAL1	Q8TDZ2	1067 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	ADAMTS14	Q8WXS8	1223 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	ZNF594	Q96JF6	807 aa	Predicted RBP	6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	GPCPD1	Q9NPB8	672 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	NGRN	Q9NPE2	291 aa	Known RBP	6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	TMEM9B	Q9NQ34	198 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	MAN2B2	Q9Y2E5	1009 aa		6.18	□□□□□ -1.42
MSI2-216	ENST00000582772	SVIL	O95425	2214 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms